!transposon_sequence_set.README.v9.41
!April 25 2005
!Comments, corrections to ma11@gen.cam.ac.uk


        TRANSPOSON SEQUENCE CANONICAL SETS FOR DROSOPHILA

This is a file of 'canonical' sequences of the transposable elements
from Drosophila.

History: These sequences were originally compiled by Takis Benos (EBI),
Leyla  Bayraktaroglu (Harvard) and Michael Ashburner (EBI & Cambridge)
with help from Aubrey de Grey (Cambridge), Joe Chillemi (Harvard) and
Martin Reese (LBL). We thank Suzi Lewis (Berkeley) for inspiration and
discussion, and Guochun Liao (Berkeley) for his repeat sequence set and
newly discovered transposable element sequences from the Berkeley P1
clones, and Lynn Crosby (Harvard) for her annotations of some elements.

Subsequent curation of these sequences has been in the context of the
Drosophila Genome Project and was a collaboration between M. Ashburner
(Cambridge), Josh Kaminker (Berkeley) and Casey Bergman (Berkeley).  From
Version 8.0 this set has been maintained by Michael Ashburner and Casey
Bergman in Cambridge.

Other sequence data sets originating from M. Ashburner are no longer
maintained.

Future plans: We plan to make each of the melanogaster sequences a real
sequence from the Release 4 melanogaster genome sequence and to enrich the
annotation.  For elements that are not 'complete' in Release 4 we will
construct a 'consensus' sequence, either as a mosaic of two or more
sequences or as a 'majority rule' consensus of aligned elements.

We thank Margi Butler, Elena Casacuberta, Madeline Crosby, Bob Levis, Mary-Lou 
Pardue, Kevin  O'Hare, Horacio Naveira, Dmitri Petrov, Steve Schaeffer, Todd 
Schlenke, Alfredo Vilesante & the authors of REBASE for sequences and/or annotations.

Errors or additions to ma11@gen.cam.ac.uk, please.

===============================================================================
March 16 2004. v.8.0
====================

1. Updates of FB identifiers.

2. Added from REPBASE (drorep.ref.4.5.3, January 2003): BS3, BS4,
   Doc4-element, Doc5-element, Fw2, Fw3, Helitron, R1-2, Tc1-2, G5A,
   G7, accord2, gypsy7, gypsy8, gypsy9, gypsy10, gypsy11, gypsy12,
   invader6.

3. ORF1 of Juan added from Repbase record.

4. A new line for synonyms has been introduced into records, e.g.:

   SY   synonym:BEL

   This is not a complete list of synonyms (for which see FlyBase),
   just those in widespread use.

April 6 2004. v.9.0
===================

1.  New records for elements from species other than D. melanogaster:
    Dana\Tom, Dvir\Dv, Dhyd\Bungy, Dbuz\Osvaldo, Dkoe\Gandalf,
    Dmau\mariner, Dhyd\Minos, Dfun\Isfun-1, Dsub\bilbo, Dsil\Loa,
    Dhet\Uhu, Dvir\Ulysses, Dsim\ninja, Dvir\Helena, Dvir\Penelope,
    Dvir\Tv1, Dvir\Tel, Dmir\TRAM, Dmir\TRIM, Dvir\Paris, Dmir\spock,
    Dmir\worf, Dwil\Vege, Dwil\Mar, Damb\P-element_T, Dbif\P-element_M, 
    Dbif\P-element_O, Dsub\SGM, Ddip\Bari1, Dpse\mini-me, Dbuz\BuT1,
    Dbuz\BuT2, Dbuz\BuT3, Dbuz\BuT4, Dbuz\BuT5, Dbuz\BuT6, Dbuz\INE-1,
    Dbuz\ISBu2, Dbuz\Galileo, Dbuz\Kepler, Dbuz\Newton, Dyak\TART,
    Dyak\HeT-A, Dvir\TART, Dvir\HeT-A.

2.  D. melanogaster Helena consensus sequence added. The Circe sequence
    has been replaced from a consensus from A. Villesante.

3. The micropia sequence has been replaced by one that lacks the 4bp
   deletion within the CDS present in the previous record.

4. New sequences for TART-A and TART-C subfamilies added (the only previous
   TART sequence (U14101) was TART-B). The sequences for Tc3 & Beagle2 have
   been extracted from the R3 genome and added. The sequence of the Q element
   has been extracted from the R1 genome and added.

5. Annotations improved for some of the sequences.

6. All annotations now use SO terms.  The syntax is:

FT   SO_feature      <feature> ; <so_id>:<start_base>..<end_base>

e.g.:

FT   SO_feature      five_prime_UTR ; SO:0000204:1..730

April 7 2004. v.9.1
===================

1. The following R1-element variants have been added: Dnet\R1A, Dtak\R1A2, 
   Dmer\R1A3, Dnet\R1B. The original melanogaster element has been
   re-named:R1A1-element.

April 7 2004. v.9.2
===================

1. The Dbuz\ISBu3, Dsub\GEM and Dvir\Uvir elements have been added.

April 18 2004. v.9.2.2
======================

1. Update of annotation of TART-C.

2. Dtei\I-element sequence added.

May 1 2004. v.9.2.3
===================

1. Added prygun as a synonym of Tirant.

June 23 2004. v.9.2.4
=====================

1. accord2 and qbert found to be the same element; accord2 sequence (AC008256)
   removed and qbert sequence (AF541947) renamed as accord2.

September 3 2004. v.9.2.5
=========================

1. Added Doc5-element as synonym of Porto1.

December 10 2004. v.9.3
=======================

1. Added the cDNA sequence for a D. melanogaster Osvaldo-like element.

April 22 2005. v.9.4
====================

1. Updates on FBgn identifiers.
2. Added sequence of the TAHRE element.

April 22 2005. v.9.41
=====================

1. A formatting error in the Helana sequence corrected.

The current data set includes 179 elements:

FB gene ID     Symbol            EMBL              Size       Comment

Retroviral elements:

FBgn0000004    17.6              X01472            7439bp     complete
FBgn0000007    1731              X07656            4648bp     complete
FBgn0000005    297               X03431            6995bp     complete
FBgn0005384    3S18              U23420            6126bp     complete
FBgn0000006    412               nnnnnnnn          7567bp     complete
FBgn0063447    accord            nnnnnnnn          7404bp     complete
FBgn0063782    accord2           AF541947          7650bp     complete
FBgn0010103    aurora-element    AB022762          4263bp     ?complete
FBgn0000199    blood             nnnnnnnn          7410bp     complete
FBgn0010302    Burdock           U89994            6411bp     complete
FBgn0022937    Circe             nnnnnnnn          7450bp     complete
FBgn0000349    copia             X02599            5143bp     complete
FBgn0043969    diver             AC004377          6112bp     complete
FBgn0063439    diver2            nnnnnnnn          4917bp     complete
FBgn0062343    Dm88              nnnnnnnn          4558bp     complete
FBgn0014947    flea              Z27119            5034bp     complete
FBgn0061513    frogger           AF492763          2483bp     ?complete
FBgn0015945    GATE              AJ010298          8507bp     complete
FBgn0063436    gtwin             nnnnnnnn          7411bp     complete
FBgn0001167    gypsy             M12927            7469bp     complete
FBgn0063435    gypsy2            nnnnnnnn          6841bp     complete
FBgn0063434    gypsy3            nnnnnnnn          6973bp     complete
FBgn0063433    gypsy4            nnnnnnnn          7369bp     complete
FBgn0063432    gypsy5            nnnnnnnn          6852bp     complete
FBgn0063431    gypsy6            nnnnnnnn          7826bp     complete
FBgn0067384    gypsy7            AE003788          5486bp     incomplete
FBgn0067383    gypsy8            AE003788          4955bp     incomplete
FBgn0067382    gypsy9            AE002591          5349bp     incomplete
FBgn0067387    gypsy10           nnnnnnnn          6006bp     incomplete
FBgn0067386    gypsy11           nnnnnnnn          4428bp     incomplete
FBgn0067385    gypsy12           nnnnnnnn         10218bp     incomplete
FBgn0001207    HMS-Beagle        AF365402          7062bp     complete
FBgnnnnnnnn    HMS-Beagle2       nnnnnnnn          7220bp     complete
FBgn0026065    Idefix            AJ009736          7411bp     complete
FBgn0063430    invader1          nnnnnnnn          4032bp     complete
FBgn0063429    invader2          nnnnnnnn          5124bp     complete
FBgn0063428    invader3          nnnnnnnn          5484bp     complete
FBgn0063427    invader4          nnnnnnnn          3105bp     complete
FBgn0063426    invader5          nnnnnnnn          4038bp     complete
FBgn0067380    invader6          NT_033778         4885bp     incomplete
FBgn0063919    Max-element       AJ487856          8556bp     complete
FBgn0063917    McClintock        AF541948          6450bp     complete
FBgn0002697    mdg1              X59545            7480bp     complete
FBgn0002698    mdg3              X95908            5519bp     complete
FBgn0002745    micropia          X14037,X15066     5461bp     complete
FBgn0003007    opus              AY180918          7521bp     complete
FBgn0063755    Osvaldo           AY089271          1543bp     incomplete
FBgn0044355    Quasimodo         AF364550          7387bp     complete
FBgn0000155    roo               AY180917          9092bp     complete
FBgn0063394    rooA              nnnnnnnn          7621bp     complete
FBgn0061485    rover             AF492764          7318bp     complete
FBgn0003490    springer          AF364549          7546bp     complete
FBgn0003519    Stalker           AF420242          7256bp     complete
FBgn0063455    Stalker2          nnnnnnnn          7672bp     complete
FBgn0063454    Stalker3          nnnnnnnn           372bp     LTR
FBgn0063897    Stalker4          AF541949          7359bp     complete
FBgn0045970    Tabor             AC007146          7345bp     complete
FBgn0004082    Tirant            nnnnnnnn          8526bp     complete
FBgn0063450    Tom1              nnnnnnnn           410bp     LTR
FBgn0040267    Transpac          AF222049          5249bp     complete
FBgn0023131    ZAM               AJ000387          8435bp     complete
FBgn0004357    Dana\Tom          Z24451            7060bp     complete
FBgn0013796    Dbuz\Osvaldo      AJ133521          9045bp     complete
FBgn0005772    Dmir\TRAM         Y08905            3452bp     ?complete
FBgn0004642    Dmir\TRIM         X59239            3111bp     ?complete
FBgn0015168    Dsim\ninja        D83207            6644bp     complete
FBgn0004146    Dvir\Ulysses      X56645           10653bp     complete
FBgn0020675    Dvir\Tel          AF009439          2485bp     incomplete
FBgn0013099    Dvir\Tv1          AF056940          6898bp     complete

non-LTR retrotransposons:

FBgn0063440    baggins           nnnnnnnn          5453bp     complete
FBgn0000224    BS                nnnnnnnn          5142bp     complete
FBgn0067624    BS3               nnnnnnnn          1790bp     ?complete
FBgn0067623    BS4               nnnnnnnn          754bp      incomplete
FBgn0063594    Cr1a              nnnnnnnn          4470bp     complete
FBgn0000481    Doc               X17551            4725bp     ?incomplete
FBgn0063534    Doc2-element      nnnnnnnn          4789bp     complete
FBgn0063533    Doc3-element      nnnnnnnn          4740bp     complete
FBgn0069587    Doc4-element      nnnnnnnn          2791bp     incomplete
FBgn0000652    F-element         AC005198          4708bp     complete
FBgn0067421    Fw2               nnnnnnnn          3961bp     ?complete
FBgn0067420    Fw3               nnnnnnnn          3132bp     ?complete
FBgn0001100    G-element         X06950            4346bp     ?complete
FBgn0063507    G2                nnnnnnnn          3102bp     complete
FBgn0063506    G3                nnnnnnnn          4605bp     complete
FBgn0063505    G4                nnnnnnnn          3856bp     complete
FBgn0063504    G5                nnnnnnnn          4856bp     complete
FBgn0069433    G5A               nnnnnnnn          2841bp     incomplete
FBgn0063503    G6                nnnnnnnn          2042bp     complete
FBgn0067419    G7                AC003788          1192bp     incomplete
FBgn0020425    Helena            nnnnnnnn          1318bp     incomplete
FBgn0004141    HeT-A             U06920            6083bp     complete
FBgn0001249    I-element         M14954            5371bp     complete
FBgn0043055    Ivk               nnnnnnnn          5402bp     complete
FBgn0046110    Juan              AY180919          4236bp     complete
FBgn0001283    jockey            M22874            5020bp     complete
FBgn0063425    jockey2           nnnnnnnn          3428bp     complete
FBgn0046701    Penelope          AF418572           804bp     incomplete
FBgn0015786    Porto1            nnnnnnnn          4682bp     ?complete
FBgn0063900    Q-element         AE002612           759bp     incomplete
FBgn0003908    R1A1-element      X51968            5356bp     complete
FBgn0067405    R1-2              nnnnnnnn          3216bp     incomplete
FBgn0003909    R2-element        X51967            3607bp     complete
FBgn0041728    Rt1a              AJ278684          5108bp     complete
FBgn0063467    Rt1c              nnnnnnnn          5443bp     complete
FBgn0042682    Rt1b              AF281636          5171bp     complete
FBgn0069343    TAHRE             AJ542581         10463bp     complete
FBgn0004904    TART-A            AY561850         13424bp     complete
FBgn0004904    TART-B            U14101           10654bp     complete
FBgn0004904    TART-C            AY600955         11124bp     complete
FBgn0042231    X-element         AF237761          4740bp     complete
FBgn0013836    Dmer\R1A3         AF015277          3772bp     incomplete
FBgn0015678    Dmir\spock        AY144571          4952bp     ?complete
FBgn0064494    Dmir\worf         AY144572          4174bp     ?complete
FBgn0013854    Dnet\R1A          AF248067          1757bp     incomplete
FBgn0013854    Dnet\R1B          AF248068          2038bp     incomplete
FBgnnnnnnnn    Dpse\mini-me      AC131959          4622bp     complete
FBgn0005661    Dsil\Loa          X60177            7779bp     ?complete
FBgn0023239    Dsub\bilbo        U73803            5540bp     complete
FBgn0013903    Dtak\R1A2         U23198            1753bp     incomplete
FBgn0013017    Dtei\I-element    M28878            5386bp     complete
FBgn0011601    Dvir\Helena       U26847             691bp     incomplete
FBgn0015679    Dvir\Penelope     U49102            4158bp     ?complete
FBgn0067468    Dvir\HeT-A        AY369259          6610bp     complete
FBgn0066148    Dvir\TART         AY219709          8500bp     complete
FBgn0067460    Dvir\Uvir         AY369259          6564bp     ?complete
FBgn0024768    Dyak\HeT-A        AF043258          5691bp     complete
FBgn0026443    Dyak\TART         AF468026          8444bp     incomplete

SINE-like elements:

FBgn0026416    INE-1             U66884             611bp     ?incomplete
FBgn0012361    Dhyd\Bungy        U14600             227bp     ?complete

IR-elements:

FBgn0005673    1360              nnnnnnnn          3409bp     complete
FBgn0005773    Bari1             X67681            1728bp     complete
FBgn0064134    Bari2             AF541951          1064bp     complete
FBgn0001181    HB                X01748            1653bp     ?incomplete
FBgn0001210    hobo              M69216            2959bp     complete
FBgn0014967    hopper            X80025            1435bp     incomplete
FBgn0067381    hopper2           AF541950          1593bp     incomplete
FBgn0063402    looper1           nnnnnnnn          1881bp     incomplete
FBgn0063401    mariner2          nnnnnnnn           912bp     complete
FBgn0002949    NOF               X15469;X51937     4347bp     complete
FBgn0003055    P-element         X06779            2907bp     complete
FBgn0003122    pogo              X59837            2121bp     complete
FBgn0004905    S-element         U33463            1736bp     ?incomplete
FBgn0063466    S2                nnnnnnnn          1735bp     complete
FBgn0026410    Tc1               nnnnnnnn          1666bp     complete
FBgn0069340    Tc1-2             nnnnnnnn          1644bp     complete
FBgn0061191    Tc3               AC009537          1743bp     complete
FBgn0063372    transib1          nnnnnnnn          2167bp     complete
FBgn0063371    transib2          nnnnnnnn          2844bp     complete
FBgn0063370    transib3          nnnnnnnn          2883bp     complete
FBgn0063369    transib4          nnnnnnnn          2656bp     complete
FBgn0020218    Damb\P-element_T  AF012414          3329bp     ?complete
FBgn0012207    Dbif\P-element_M  X60990            2935bp     complete
FBgn0012207    Dbif\P-element_O  X71634            2986bp     complete
FBgn0063576    Dbuz\BuT1         AF162798           769bp     ?incomplete
FBgn0063575    Dbuz\BuT2         AF368884          2775bp     ?incomplete
FBgn0063575    Dbuz\BuT3         AF368870           795bp     ?incomplete
FBgn0063573    Dbuz\BuT4         AF368868          1447bp     ?incomplete
FBgn0063572    Dbuz\BuT5         AF368868           669bp     ?incomplete
FBgn0069879    Dbuz\BuT6         AY187768           387bp     ?incomplete
FBgn0045754    Dbuz\INE-1        AF368900          1467bp     ?incomplete
FBgn0045754    Dbuz\ISBu2        AF368867           726bp     ?incomplete
FBgn0045754    Dbuz\ISBu3        AY313771           993bp     ?incomplete
FBgn0020486    Ddip\Bari1        Y13852            1676bp     incomplete
FBgn0044997    Dfun\Isfun-1      AJ309320           928bp     incomplete
FBgn0003948    Dhet\Uhu          X63028            1658bp     ?complete
FBgn0010242    Dhyd\Minos        Z29098            1773bp     complete
FBgn0014755    Dkoe\Gandalf      U29466             979bp     incomplete
FBgn0002651    Dmau\mariner      M14653            1286bp     complete
FBgn0026463    Dsub\GEM          AJ131629          1730bp     ?complete
FBgn0015678    Dvir\Paris        Z49253            1728bp     complete

MITE elements:

FBgn0066141    Dwil\Mar           AF518731          610bp     ?complete
FBgn0066140    Dwil\Vege          AF518730          884bp     ?complete
FBgn0069871    Dsub\SGM           AF043638          823bp     ?complete

Foldback elements:

FBgn0000638    FB                V00246            1106bp     ?incomplete
FBgn0027840    Dbuz\Galileo      AY187769          2304bp     ?incomplete
FBgn0063570    Dbuz\Kepler       AF368884           722bp     ?incomplete
FBgn0063569    Dbuz\Newton       AF368890          1510bp     ?incomplete

Helitron elements:

FBgn0067418    Helitron          AE002840           564bp     ?incomplete

Class uncertain:

FBgn0000513    Dvir\Dv           X03936             845bp     ?incomplete
===============================================================================

________________________________________________________________________
!transposon_sequence_set.embl.v.9.41
!April 25 2005
!See transposon_sequence_set.readme.v9.41 for description & comments.
!Comments, corrections to ma11@gen.cam.ac.uk
!
ID   DME9736    standard; DNA; INV; 7411 BP.
XX
AC   AJ009736;
XX
DR   FLYBASE; FBgn0026065; Idefix.
XX
FT   source          AJ009736:1..7411
FT   SO_feature      five_prime_LTR ; SO:0000425:1..600
FT   SO_feature      three_prime_LTR ; SO:0000426:6841..7411
FT   SO_feature      CDS ; SO:0000316:<988..2031
FT                   /db_xref="FLYBASE:FBgn0027381; Idefix\gag"
FT                   /db_xref="SPTREMBL:O96739"
FT                   /protein_id="CAA08806.1"
FT                   /translation="ARKLKDIMAVPQLSETHLNQLLNQIKELNYYDGAPGKLSGFVNQV
FT                   EQLLSLYPTQEARQAHVIYGAVKRLLVDSALEVVTQERANTWLDMKKALAMAFKDHRPY
FT                   VTLIRQLEDISYPGSICKFIEKLETQYWIMFDKLELESDHVDKSNYTEMLNKTVKSVID
FT                   RKLPDRIYMSLARKDIDTIYKLKQASMELGLYDAIPENHRSNRTEMNKRRNRGNYNQNN
FT                   NQKYYNNRNHNYSNYYPSMNQNHNTQPPQNPTQPMTNQNQYSPRFIPNNQRGNYYAFRR
FT                   DLTQAQQNNPLNNTLNFQPSTSNNINRQGPVKRQRESQSDQSRMDVNFHQAASDTQMIE
FT                   KDIQVPM"
FT   SO_feature      CDS ; SO:0000316:<1950..5402
FT                   /db_xref="FLYBASE:FBgn0027380; Idefix\pol"
FT                   /db_xref="SPTREMBL:O96740"
FT                   /protein_id="CAA08807.1"
FT                   /translation="PKQDGCKFSSSCLGHSNDREGHTSPYVKIIHHNKNYKGMIDTGSS
FT                   INIIRENFENLEEKEENLIVYTIKGPITLKRSIIIKPTSVCPSAQKFYIHKFSDNYDFL
FT                   LGRKYLEDTKAKIDYANETVTLGSKVFKFLYEEKKGETASKCLDPQEKNDSALVDRTKP
FT                   KMQKVKTAPKCLKPKHQQQKKETALPKCLISNVVKDTVDNDVTHLDPMSVDNDIVNFAI
FT                   NNELRECNEYRLEHLNAEEVECLKKFLYEYRDIQYKEGENLTFTSTIKHVIQTQHEDPV
FT                   YRKPYKYPQSVDQEVNKQIKEMIEQGIVRKSKSPYCSPIWVVPKKADASGKQKFRLVVD
FT                   YRNLNEITVNDKFPIPRMDEILDKLGRCQYFTTIDLAKGFHQIQMDENSIAKTAFSTKH
FT                   GHYEYTRMPFGLKNAPATFQRCMNNLLEDLIYKDCLVYLDDIIVYSTPLEEHILSLKKV
FT                   FEKLRDANLKLQLDKCEFMKKETEFLGHIVTTNGIKPNPNKTKAITNFPLPKTPKQIKS
FT                   FLGLCGFYRKFIPNFAKIVKPMTLKLKKGAIIDTKCKEYIESFEKLKVLITSDPILIYP
FT                   DFSKPFSLTTDASNVAIGAVLSQNHKPVCYASRTLNEHEINYATIEKELLAIVWATKYF
FT                   RSYLFGRPFEVLSDHKPLVWLNNIKEPNMKLQRWKIKLNEFDYKIKYLPGKENHVADAL
FT                   SRTKIEVMVGEVANSADATIHSAIEDNLNYIPITERPINYFSRQIEIEKGDNDTTSVQH
FT                   LFQKLKIKIVYKEMTPELAKNLIKEYVCTKKSAIYFPNDEDFLIFQRAFTEIISPNNFT
FT                   KLLRCTTKLIDILTYAEFKDLILKKHKELLHPGIEKTINLFKEEYYYPDSQKLIQTIIN
FT                   ECQICYLAKTEHQTQMTYETTPEIFNTREKYMIDFYLTGNQIFLSCIDIYSKFASLVEL
FT                   KSRDWLEAKRAITKIFNDMGKPQEIKADKDSAFMCLALQNWLRSEGVQISISTSKNGIS
FT                   DIERFHKTVNEKLRIIGSQQNVEDRCTKFERILYIYNHKTKHNSTKRFPADIFLYAGSP
FT                   DFNVQQNKIDRIEYLNKNRHDFEVDIKYRQAPLVKSKITNPFKKTGRIGQVDDKHFEET
FT                   NRGRKIVHYKSKFKKQKKFNKSKYDNSRPTKEAQSTQHTSNNA"
FT   SO_feature      CDS ; SO:0000316:5248..6780
FT                   /db_xref="FLYBASE:FBgn0027382; Idefix\env"
FT                   /db_xref="SPTREMBL:O96741"
FT                   /protein_id="CAA08808.1"
FT                   /translation="MINISKKQIVAGRSFTISQNLRNRKSLIRANMIIPDQPKKHKVHN
FT                   ILLIMLSCILSLIITVKCNNIEVNPVNAKNGYLIFQTGTMEIPTSYEYHYLSINITKTM
FT                   LMFEDIVSEANNYPNVPQIQYLVDKLKREINGLRIISRSKRGLLNVVGKAYKYLFGTLD
FT                   EDDREELEEKINNMSEDSVKTHDLNTILDVINSGIDIINKLKVDKEQHQQIAVLIFNLE
FT                   QFTEYIEDIELGLQLTRLGIFNPRLLKHDYLKHVNSEKMLKIKTSTWLKTDTNEILIIS
FT                   HIPSEVTKVPIFQIVPYPDEHNYILTEQIFDKFYIFDNQVFHKDTNRDIFDKCIIGIIK
FT                   QEQTQCKYIKTHKNYQINYIEPNILLTWNIPETAVNQDCTHNKILISGNNIIKIKNCTI
FT                   QIDEFLISNNLADFTQTIYITNNVTRLEPINHLQTREMIETHVKHYNFFQIICITTFVI
FT                   MIISLTLYVAYKFKNIPKKIIVNIVSKKNTRTLKIMSMKIFNKEIILPYTQI"
XX
CC   Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1).
CC   Takis Benos and Michael Ashburner, 1-Feb-1999.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7411 BP; 3047 A; 1363 C; 1109 G; 1892 T; 0 other;
     GTGACATATC CATAAGTCCC TAAGACTTAA GCATATGCCT ACATACTAAT ACACTTACAA        60
     CACATACACC CCAATACAAC ATACACTACT CCGGATGTAC CCAACAGATA CCAGATAAGA       120
     ATAAGATTGT TATATGATCC TCGAGAATGG AAAAAACCCC AATTCTAGAT AAGTCACCCA       180
     CTGGTAGACT AAACATCCGT CCCCTAATTT AAACAATTCC TTGCTTAAGC CTCACCCCAT       240
     CGTCACATTC CCACGTTCAA AGCTCGGAGC CGCAATCCCG AAAAACAAAA GTATCGATTT       300
     CAATAAACAA ATTATAAGAA TCTAAGAGCA CTTGTATCCA AGAGCAAATG CACTTGAATC       360
     CAAGAGAAAC GCAAAGCTTT TTCTCTTTAC GATCAGAATC CTAAAGTCTA AAGTCCATAT       420
     TAGAAAAGCT CGATACCGAG GCTTGAACGT CAACCAAATC AGAATAATTA TCAGAGTTCA       480
     GTTTGAGACC TAATTGTAAA AGGTTCGGTG TTCTTCTCAA ATAAAAAGAT TGTAATCATT       540
     TAGTGAAATA AAAATTATAT TTTTTTCACT TATAAATATT GCAAGTATTT AATTGGCGCA       600
     GTCGGTTAGG ATCCAATAAA ATAAAAGAGT CCTTTTAGTA CGGTACTGAT CAACTGAAGG       660
     ATATGCTATA CGACTAGCTA TCCAAGATCA GCGAATTAAA ATAGTGATTC AAAAATATTT       720
     TTTAATCCGC AAAAGAATCT ACGTGAAAGT AGTATTCAAA ATAAAATCCC GTGCGGTCGG       780
     AAACAAAAAT TAATTTAAAT TTTTTAATTC CGAAACTTAA AACCAAGTTT AAAGAAAACT       840
     TAAAATCAAG AAAACTTAAA ACCAAGTTTA AAGAAAACTT AAAATCAAGA AAACTTAAAA       900
     CCAAGTTTAA AGAAAACTTA AAATCAAGAA AACTTAAAAC CAAGTTTAAA GAAAACTCAA       960
     AATCAAGAAA ACTTAAAGCC AAAATAAGCT AGAAAACTAA AAGACATCAT GGCAGTCCCA      1020
     CAACTCTCAG AAACACACCT AAACCAACTG CTAAACCAAA TCAAAGAATT AAACTACTAC      1080
     GATGGCGCAC CTGGCAAATT ATCTGGATTC GTCAACCAAG TGGAACAACT GCTCAGTTTA      1140
     TACCCAACAC AGGAAGCAAG ACAGGCACAC GTCATATATG GAGCAGTGAA GCGGTTATTA      1200
     GTGGATTCAG CCTTAGAAGT CGTAACCCAG GAAAGAGCTA ACACATGGCT GGACATGAAG      1260
     AAAGCACTGG CAATGGCATT CAAAGACCAT AGACCTTATG TAACTCTCAT CAGACAATTA      1320
     GAAGACATAT CATACCCAGG AAGTATCTGT AAGTTTATAG AAAAATTAGA AACACAATAC      1380
     TGGATTATGT TCGATAAGTT AGAATTAGAA AGTGACCATG TTGATAAATC GAATTATACC      1440
     GAAATGTTAA ACAAAACTGT TAAATCAGTA ATAGATCGAA AACTGCCGGA TAGAATTTAT      1500
     ATGTCTTTGG CACGTAAAGA TATTGATACA ATTTATAAAT TAAAACAAGC ATCAATGGAA      1560
     TTAGGCCTTT ATGATGCTAT TCCAGAAAAT CACCGTTCTA ATAGAACAGA AATGAATAAA      1620
     CGTAGGAACA GGGGAAACTA TAATCAAAAT AATAATCAAA AATATTACAA TAATAGAAAT      1680
     CACAACTACA GTAATTATTA TCCTAGCATG AATCAGAATC ATAATACACA ACCACCTCAG      1740
     AATCCGACTC AACCTATGAC AAATCAAAAC CAATATTCAC CGCGTTTCAT ACCGAATAAT      1800
     CAAAGAGGGA ATTATTATGC ATTTAGACGA GACTTAACAC AAGCTCAGCA GAACAACCCA      1860
     CTTAATAACA CCCTTAACTT CCAACCTTCG ACATCGAATA ATATTAACAG ACAAGGGCCA      1920
     GTAAAAAGAC AACGCGAGAG TCAGAGTGAC CAAAGCAGGA TGGATGTAAA TTTTCATCAA      1980
     GCTGCCTCGG ACACTCAAAT GATAGAGAAG GACATACAAG TCCCTATGTA AAAATAATTC      2040
     ATCATAATAA AAATTATAAG GGAATGATCG ATACAGGATC ATCAATTAAC ATCATAAGAG      2100
     AAAATTTTGA GAACTTAGAA GAAAAGGAAG AAAACCTAAT AGTATACACT ATTAAAGGAC      2160
     CAATAACACT AAAGAGAAGT ATAATAATAA AACCTACTTC AGTATGTCCG TCTGCTCAAA      2220
     AATTCTACAT TCACAAATTT TCTGATAACT ATGATTTCTT GTTAGGTCGA AAGTATTTAG      2280
     AAGATACAAA AGCTAAAATA GATTATGCTA ACGAAACAGT AACACTAGGC TCAAAAGTAT      2340
     TTAAGTTTCT CTATGAAGAA AAGAAGGGCG AGACCGCATC CAAATGCCTT GACCCACAAG      2400
     AAAAGAATGA TTCCGCTCTA GTGGACAGAA CCAAACCAAA AATGCAAAAG GTTAAGACCG      2460
     CACCTAAGTG CCTTAAACCA AAGCATCAAC AGCAGAAGAA AGAGACCGCA TTACCCAAAT      2520
     GCCTCATTTC AAATGTTGTT AAAGACACAG TGGACAATGA TGTAACACAT CTCGATCCCA      2580
     TGTCCGTTGA CAACGATATA GTCAACTTCG CGATTAACAA TGAGTTACGC GAATGTAACG      2640
     AGTATAGACT CGAACACTTA AATGCAGAGG AAGTTGAATG TTTAAAGAAG TTCCTATACG      2700
     AATATAGAGA CATTCAGTAC AAAGAGGGCG AAAATTTGAC CTTCACCAGT ACTATTAAAC      2760
     ATGTCATCCA GACTCAACAC GAAGACCCAG TATACCGTAA ACCCTACAAG TACCCTCAAA      2820
     GCGTTGACCA AGAAGTTAAC AAACAAATTA AAGAAATGAT AGAACAAGGG ATTGTTCGCA      2880
     AATCGAAGTC CCCTTATTGT TCTCCTATTT GGGTGGTCCC CAAGAAGGCA GACGCCTCTG      2940
     GGAAACAAAA ATTCAGGTTG GTAGTCGATT ACAGGAACCT AAATGAGATA ACTGTTAACG      3000
     ACAAATTTCC CATTCCCCGA ATGGATGAGA TATTGGACAA ACTAGGTAGA TGCCAATACT      3060
     TTACCACTAT AGATCTAGCC AAGGGTTTTC ACCAAATCCA AATGGATGAA AATTCTATTG      3120
     CAAAAACAGC TTTTTCAACT AAGCATGGGC ATTATGAATA TACTCGTATG CCCTTTGGTT      3180
     TAAAAAACGC TCCAGCTACT TTTCAGAGAT GCATGAATAA TCTTCTGGAA GATTTAATCT      3240
     ACAAAGACTG TTTAGTCTAT TTAGACGATA TTATTGTTTA TTCCACTCCA TTGGAAGAAC      3300
     ACATTTTATC CCTAAAGAAA GTCTTTGAAA AACTGAGAGA CGCTAATTTA AAGTTGCAAC      3360
     TAGATAAATG TGAATTCATG AAGAAAGAAA CTGAATTCCT AGGACACATC GTCACAACAA      3420
     ATGGCATCAA ACCAAATCCA AATAAAACTA AAGCAATTAC AAATTTTCCA TTACCCAAGA      3480
     CACCTAAGCA AATAAAATCA TTTTTGGGAT TATGTGGATT CTATCGCAAG TTTATTCCTA      3540
     ACTTTGCCAA AATAGTTAAA CCCATGACCC TCAAATTAAA GAAAGGTGCT ATAATAGACA      3600
     CCAAATGTAA AGAATACATC GAATCATTTG AAAAATTAAA AGTTTTGATA ACTTCAGACC      3660
     CGATATTAAT CTATCCTGAT TTTTCAAAAC CTTTTTCTTT GACAACTGAT GCTAGCAACG      3720
     TAGCTATTGG TGCAGTGTTA TCACAAAATC ACAAGCCAGT TTGTTATGCC AGTAGAACGC      3780
     TAAACGAACA TGAAATCAAC TATGCTACGA TTGAAAAAGA ATTGTTAGCT ATAGTTTGGG      3840
     CTACAAAATA TTTCAGGTCA TACTTATTCG GCAGACCATT TGAAGTATTA AGTGATCACA      3900
     AGCCACTGGT ATGGCTCAAC AACATTAAAG AACCAAACAT GAAATTGCAA AGATGGAAAA      3960
     TAAAACTTAA TGAATTCGAT TATAAAATCA AATATCTTCC AGGCAAAGAA AACCATGTCG      4020
     CGGATGCTCT TTCCCGCACG AAAATAGAAG TTATGGTTGG CGAGGTCGCA AATAGCGCAG      4080
     ACGCAACTAT ACACAGTGCC ATTGAAGATA ATCTAAATTA CATACCCATA ACAGAAAGAC      4140
     CAATAAATTA CTTCTCTAGA CAAATAGAGA TAGAAAAAGG CGATAACGAT ACAACAAGTG      4200
     TACAACATTT GTTTCAAAAA TTAAAGATTA AGATAGTCTA TAAAGAAATG ACACCTGAAC      4260
     TCGCCAAAAA CCTCATTAAG GAATATGTGT GCACCAAAAA GAGTGCAATT TATTTCCCTA      4320
     ATGACGAAGA TTTTCTGATC TTCCAGAGAG CGTTTACCGA AATTATAAGC CCTAACAATT      4380
     TCACAAAACT CTTGAGATGT ACCACAAAGT TAATTGATAT ACTAACGTAT GCAGAATTCA      4440
     AAGATTTAAT CTTAAAGAAA CATAAGGAAC TTTTACATCC GGGTATAGAA AAAACAATCA      4500
     ATTTATTTAA AGAAGAATAT TACTATCCTG ATAGTCAAAA GCTTATTCAA ACCATTATCA      4560
     ATGAATGTCA AATTTGTTAT CTAGCAAAAA CGGAACATCA AACACAAATG ACATATGAGA      4620
     CTACACCAGA AATATTTAAC ACAAGAGAAA AATACATGAT AGATTTTTAT CTCACAGGAA      4680
     ACCAGATCTT CTTATCTTGC ATTGATATCT ATTCGAAATT TGCATCACTA GTTGAATTAA      4740
     AAAGTAGAGA TTGGCTAGAA GCAAAAAGAG CCATTACTAA AATATTCAAT GACATGGGAA      4800
     AACCGCAAGA AATTAAAGCA GACAAAGACT CAGCTTTTAT GTGTTTAGCC TTACAAAATT      4860
     GGTTAAGATC TGAAGGTGTA CAAATTTCTA TAAGCACTAG CAAAAATGGT ATATCTGATA      4920
     TAGAAAGATT CCACAAGACC GTAAACGAAA AGCTAAGAAT CATTGGTAGC CAACAAAATG      4980
     TTGAAGATAG GTGCACAAAA TTCGAAAGAA TTCTATACAT ATACAATCAC AAAACTAAAC      5040
     ATAATAGTAC TAAAAGATTT CCAGCAGACA TTTTCCTATA TGCAGGCAGT CCAGATTTTA      5100
     ATGTACAACA AAACAAAATC GATAGGATAG AATACCTCAA TAAGAATAGA CACGATTTTG      5160
     AAGTTGATAT AAAATATAGA CAAGCCCCAC TTGTAAAAAG TAAAATAACC AATCCATTTA      5220
     AAAAGACAGG AAGAATTGGA CAAGTAGATG ATAAACATTT CGAAGAACAA AATCGTGGCA      5280
     GGAAGATCGT TCACTATAAG TCAAAATTTA AGAAACAGAA AAAGTTTAAT AAGAGCAAAT      5340
     ATGATAATTC CAGACCAACC AAAGAAGCAC AAAGTACACA ACATACTTCT AATAATGCTT      5400
     AGTTGCATAC TATCACTTAT CATCACGGTC AAGTGCAACA ATATAGAAGT AAATCCAGTA      5460
     AACGCGAAAA ATGGATACCT TATATTCCAA ACAGGAACAA TGGAAATTCC AACCAGCTAT      5520
     GAATACCATT ATTTAAGCAT AAACATAACA AAGACAATGC TCATGTTCGA AGATATAGTA      5580
     AGTGAAGCAA ACAACTATCC TAATGTACCA CAAATACAAT ATTTAGTCGA CAAATTAAAA      5640
     CGAGAAATAA ATGGGTTAAG AATTATTAGT CGAAGTAAAA GAGGTCTTTT AAACGTAGTA      5700
     GGAAAAGCAT ACAAATACTT ATTCGGCACA TTAGATGAGG ATGACAGAGA AGAGTTAGAA      5760
     GAAAAAATAA ACAACATGTC AGAAGACTCT GTAAAAACCC ATGACCTAAA CACGATTCTA      5820
     GATGTAATCA ATAGTGGTAT AGATATAATT AATAAGCTCA AAGTAGATAA AGAACAACAC      5880
     CAACAAATTG CGGTACTAAT ATTTAACCTA GAGCAATTTA CAGAATATAT AGAAGACATA      5940
     GAATTGGGTC TGCAATTAAC CAGACTAGGA ATTTTCAATC CAAGATTACT AAAGCATGAC      6000
     TATTTAAAAC ATGTAAATTC AGAAAAAATG CTAAAGATAA AAACGTCAAC CTGGCTTAAA      6060
     ACAGACACGA ACGAAATTTT GATTATTTCC CATATTCCTA GCGAAGTTAC TAAAGTTCCA      6120
     ATATTCCAAA TTGTTCCGTA CCCAGATGAA CATAATTATA TTCTAACCGA GCAAATATTC      6180
     GATAAATTCT ACATATTTGA TAACCAAGTA TTCCATAAAG ATACCAATAG GGATATATTC      6240
     GACAAATGTA TTATTGGAAT CATCAAACAA GAGCAAACTC AATGCAAATA TATTAAAACA      6300
     CATAAAAATT ACCAAATAAA TTATATAGAA CCAAATATAC TATTAACATG GAATATTCCT      6360
     GAAACAGCTG TTAACCAAGA CTGTACACAC AATAAAATAT TAATTTCAGG AAACAACATC      6420
     ATTAAAATTA AAAATTGTAC CATACAAATA GATGAATTCT TAATCTCTAA TAATCTAGCA      6480
     GACTTTACAC AAACAATTTA TATCACCAAC AATGTAACAC GTCTAGAACC AATAAATCAC      6540
     TTACAAACGA GAGAAATGAT AGAAACCCAT GTAAAACACT ATAACTTTTT TCAAATTATA      6600
     TGCATTACAA CGTTCGTCAT AATGATAATT AGTTTGACTC TGTATGTAGC ATATAAGTTT      6660
     AAAAATATAC CTAAGAAAAT TATTGTCAAT ATCGTAAGCA AAAAGAACAC ACGCACCTTG      6720
     AAAATAATGT CAATGAAAAT ATTCAACAAG GAAATAATAT TACCTTATAC CCAAATTTAA      6780
     CGACCTGAGG ACAGGCCAAA TTCAAAGGTT GGGGGAGTGA CATATCCATA AGTCCCTAAG      6840
     ACTTAAGCAT ATGCCTACAT ACTAATACAC TTACAACACA TACACCCCAA TACAACATAC      6900
     ACTACTCCGG ATGTACCCAA CAGATACCAG ATAAGAATAA GATTGTTATA TGATCCTCGA      6960
     GAATGGAAAA AACCCCAATT CTAGATAAGT CACCCACTGG TAGACTAAAC ATCCGTTCCC      7020
     CTAATTTAAA CAATTCCTTG CTTAAGCCTC ACCCCATCGT CACATTCCCA CGTTCAAAGC      7080
     TCGGAGCCGC AATCCCGAAA AACAAAAGTA TCGATTTCAA TAAACAAATT ATAAGAATCT      7140
     AAGAGCACTT GTATCCAAGA GCAAATGCAC TTGAATCCAA GAGAAACGCA AAGCTTTTTC      7200
     TCTTTACGAT CAGAATCCTA AAGTCTAAAG TCCATATTAG AAAAGCTCGA TACCGAGGCT      7260
     TGAACGTCAA CCAAATCAGA ATAATTATCA GAGTTCAGTT TGAGACCTAA TTGTAAAAGG      7320
     TTCGGTGTTC TTCTCAAATA AAAAGATTGT AATCATTTAG TGAAATAAAA ATTATATTTT      7380
     TTTCACTTAT AAATATTGCA AGTATTTAAT T                                     7411
//
ID   DMIS176    standard; DNA; INV; 7439 BP.
XX
AC   X01472; J01060; J01061;
XX
DR   FLYBASE; FBgn0000004; 17.6.
XX
FT   source          X01472:1..7439
FT   SO_feature      five_prime_LTR ; SO:0000425:1..512
FT   SO_feature      three_prime_LTR ; SO:0000426:6928..7439
FT   SO_feature      TATA_box ; SO:0000174:372..377
FT   SO_feature      TATA_box ; SO:0000174:7271..7277
FT   SO_feature      primer_binding_site ; SO:0005850:511..529
FT   SO_feature      polyA_signal_sequence ; SO:0000551:372..377
FT   SO_feature      polyA_signal_sequence ; SO:0000551:7299.7304
FT   SO_feature      RR_tract ; SO:0000435:6917..6927
FT   SO_feature      CDS ; SO:0000316:1074..2393
FT                   /db_xref="FLYBASE:FBgn0044339; 17.6\gag"
FT                   /db_xref="SWISS-PROT:P04282"
FT                   /protein_id="CAA25701.1"
FT                   /translation="MAQEPAIVPPLSDSNMTQVAYQIGNVEKFNGDPGSLYTFVSRIDY
FT                   ILALYATGDERQQQIIFGHIERSISGEVMRCIGAYDMYTWQQLRRQLVLNYKPQTPNHV
FT                   LLEEFRKTPFRGNVRAFLEEAESRRQTLTSKLELEQDLEEKTFYLKLIKSSIESLIEKL
FT                   PTHIYLRINNHNIPDLRSLINLLQEKGMYEQINHTSTHVQKQNFSDKPQKSFNQNTNQS
FT                   NNIRKYPTPFLHYNSPIPYQAPQIYQTPPTNNPLYRHPIPYHPNPNNVFQPSQQNNVFQ
FT                   PSQQNNAFQPNQRTNFTSRPIFNTNRNNAFDQNRFGQQPQYQNQQSTQNSSSYVPNRPI
FT                   KRLRPANSGQTGMSVDETLYQEDAFYQQCVPYDYFYYPTYDHSDYYPENQYQIDENNQN
FT                   LQRTQQLQQINTDETNNDNQEPNVEQAENFQPQALENPNI"
FT   SO_feature      CDS ; SO:0000316:2345..5518
FT                   /db_xref="FLYBASE:FBgn0014453; 17.6\pol"
FT                   /db_xref="SWISS-PROT:P04323"
FT                   /protein_id="CAA25702.1"
FT                   /translation="TGRKFSATSLGKPQYITIKYKENNLKCLIDTGSTVNMTSKNIFDL
FT                   PIQNTSTFIHTSNGPLIVNKSIIIPSKILFPTTNEFLLHPFSENYDLLLGRKLLAEAKA
FT                   TISYRDQEVTLYNNKYKLIEGIATHEQSHFQNVNMIPDTMLRQPNKISPILESDLYRLE
FT                   HLNNEEKQRLCALLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSYPQAYEQE
FT                   VESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHP
FT                   IPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN
FT                   APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLD
FT                   KCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPN
FT                   FADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASD
FT                   VALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSD
FT                   HQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSRIKLEETYLSEQT
FT                   QHSAEEDNSDLIFITERPLNTFNRQVIFSKGPPDIKVTKYFKKHITQIFYDIMTREKAE
FT                   QYLIDHFCGKKSALYIESDADFEVIQAAHKLAINTKYTKILRSTILLKNITTYAEFKEL
FT                   ILTAHEKLLHPGIQKTTKLFGETYYFPNSQLLIQNIINECSICNLAKTEHRNTDMPTKT
FT                   TPKPEHCREKFMIDIYSSEGKHYVSCIDIYSKFATLEEIKTKDWIECKNALMRIFNQLG
FT                   KPKLLKADRDGAFSSLALKRWLESEEVELQLNTTKTGVADIERLHKTINEKIRIIKTSD
FT                   DEETKLSKMETVLNIYNHKTKHDTTGQTPAHIFLYAGQPILDTQQNKENKINKINNDRV
FT                   EYEVDTRYRKGPLQKGKLENPFKPTKNVEQTDSDHYKITNRNRITHYYKTQFKKRKKNN
FT                   QLSISQAPGT"
FT   SO_feature      CDS ; SO:0000316:5488..6903
FT                   /db_xref="FLYBASE:FBgn0027624; 17.6\env"
FT                   /db_xref="SWISS-PROT:P04283"
FT                   /protein_id="CAA25703.1"
FT                   /translation="SALNFTGTWHLITLLLMLITTVHGQQIEINNIDTNHGYLLFSDKP
FT                   VQIPSSFEHHCLRINLTEIDTIADYFEQRLRTDYHAPQVKFLYNKMRRELAGIALRHRN
FT                   KRGLINIVGSVFKYLFGTLDENDRVDIQRKLETNAHNSVNLHELNDAIQLINDGMQKIQ
FT                   NYENNSNIINSLLYELMQFTEYIEDVEMGMQLSRLGLFNPKLLNYDKLENVNSQNILNI
FT                   KTSTWINYNDNQLLIISHIPINFSLINTVKIIPYPDSNGYQLEYTDTQSYFERENKVYN
FT                   NENKEINNECVTNIIKHLKPICNFESIHTDEIIKYIEPNTIVTWNLTQTSLKQNCQNSF
FT                   NNIKIKGNKMIKVTQCKIEINSIILSENLFKPEIDLTPLYTPLNITKIKTVKHNDINEM
FT                   ISQNNITLYIFMTTVIIILILLYLYLRYVSFNPFMMLYAKLKLRKNQNQNTAQQIEMED
FT                   VPLPLLYPSIPAQV"
XX
CC   Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 7439 BP;  2985 A; 1512 C; 1048 G; 1894 T; 0 other;
     AGTGACATAT TCACATACAA AACCACATAA CATAGAGTAA ACATATTGAA AAGCCGCATA        60
     CGTAAACAAT AAGTGACCAC CATGCTAATG TGGATCAAAT AACAAAAATA TCCACTCTGC       120
     ATTTTGACAC CCCCATACTG TATGCCATCT GCGCAGTATG CATTCTAATA AACAAATTCT       180
     TTGACAGCGG CACTTAGCCA TTCTTGTAAA CAAATCTTAA AGTCTGCCTG CTCTCTCTGA       240
     GGCTTCTCCT CCACTTAAGA ATCCAAGAGC AATGCTCTCC CAAAAACACT AACATATTCT       300
     TTAAGCAAGC ACAGAGGCTT CTCCTCATTT TCACTTTCAT TTGATTTTCA GTCTTAAGCT       360
     GAACGTTAAT CAATAAACAA CACAATCGAT ACCGAAATTT TGATTCGTTT TATTTTGGCA       420
     AAACTCAATT TTCAGCGTTG GTCTTAGTTC ATATTCGGAA CGGTCCATTT AATAGACTCA       480
     AAACTATTTA TTGCAACCAT TTATTTGCAA TTGGCGCAGT CGATGTGATC AGTGTTAAAG       540
     TTCCTTGATG CGGTAACCAG ATTTGCCAAT TCCTGTGTTC TTTTTGTTCT CTGACAAAAG       600
     TACCACGATA ACGGGCACCC ACGTGACGGT TAATATCGCT TTAAGTTTTT AATTAAACCT       660
     CGACAATAAA GTGAAACCGA AAAATCACAA TTTGCCTAAA CAAACCTGAA TTTATTATCA       720
     GGAAGACGCT ATTGAATTTG TGAGAGGCTG TAAATCCAAT TGGTTACCTC AAAGACCCAC       780
     GAAAAAGCTA TAGTGCAACC CTTGCGAAAA TCAAAACCTA TCTTAAAAAA AAAAAAAAAA       840
     TATAAATAAT AAATTAATAA GCGAAAATTA AAACGTATTA AAAGTAAGAA TAATAAATAA       900
     ATAAGTGAAA ATTCTATATG ATAAAAATTA AAAATAAGAA TAATAAATAA AAAGACAACA       960
     TTTTAAATTA AACAATATTA AAAAAATATA AAAATATTAA AAACTATATT AAAAAAAAAA      1020
     AAAAAACAAA AAAACAAAAA AAAAAAAATA AATAAATAAT CCAAAAATCA AAAATGGCTC      1080
     AAGAACCAGC AATTGTGCCA CCACTATCAG ACAGCAACAT GACCCAGGTT GCCTACCAGA      1140
     TTGGCAATGT GGAGAAATTC AACGGTGATC CAGGCTCACT ATACACCTTT GTGAGTCGAA      1200
     TTGATTACAT ACTGGCTCTT TATGCTACCG GAGATGAACG CCAACAGCAG ATCATATTTG      1260
     GGCATATTGA ACGCAGCATC AGCGGAGAAG TTATGCGCTG CATTGGAGCC TATGACATGT      1320
     ACACCTGGCA GCAGCTTAGA AGACAATTGG TACTCAACTA TAAACCCCAG ACCCCTAACC      1380
     ACGTTCTTTT AGAAGAGTTT CGAAAGACCC CATTTCGAGG CAATGTACGA GCATTCCTGG      1440
     AAGAAGCAGA AAGCCGCAGA CAAACACTTA CTAGTAAGCT TGAATTAGAG CAAGATCTTG      1500
     AAGAAAAGAC TTTTTATTTG AAATTAATAA AATCCAGTAT AGAATCACTA ATTGAAAAAT      1560
     TACCTACACA CATTTATTTA AGAATAAATA ACCACAACAT ACCAGATTTG CGATCACTTA      1620
     TAAACCTTTT ACAAGAGAAG GGCATGTACG AACAAATAAA TCATACAAGT ACACATGTCC      1680
     AAAAACAAAA TTTCTCTGAT AAGCCACAAA AGTCCTTTAA TCAAAATACT AATCAGTCTA      1740
     ACAATATCAG AAAATATCCA ACACCTTTCC TACATTATAA TTCACCAATA CCATATCAAG      1800
     CTCCACAAAT TTATCAAACA CCACCAACTA ATAACCCACT TTATCGTCAT CCAATACCCT      1860
     ACCACCCTAA TCCAAACAAT GTTTTTCAAC CAAGCCAACA AAACAATGTT TTCCAACCAA      1920
     GCCAACAAAA CAATGCTTTT CAACCAAATC AACGAACAAA CTTTACATCT CGACCAATTT      1980
     TTAACACCAA TCGAAACAAT GCATTCGATC AGAATAGGTT CGGACAACAA CCCCAATATC      2040
     AAAATCAACA ATCAACACAA AATTCAAGTT CCTATGTACC CAATCGACCA ATAAAACGAT      2100
     TAAGACCAGC TAATAGTGGA CAGACTGGGA TGAGTGTTGA CGAAACATTA TATCAAGAGG      2160
     ACGCTTTTTA TCAGCAGTGT GTTCCATATG ACTATTTTTA TTATCCAACT TACGACCATT      2220
     CAGACTATTA TCCAGAAAAT CAATATCAAA TTGACGAAAA CAACCAAAAT TTACAAAGAA      2280
     CACAACAGTT ACAGCAGATT AATACAGACG AGACAAACAA TGACAACCAA GAACCCAATG      2340
     TTGAACAGGC CGAAAATTTT CAGCCACAAG CCTTGGAAAA CCCCAATATA TAACAATTAA      2400
     ATACAAAGAA AATAATTTGA AATGCCTTAT TGATACCGGA TCAACAGTTA ACATGACATC      2460
     TAAAAATATA TTTGATTTAC CAATCCAGAA TACTAGTACT TTTATTCATA CCAGCAATGG      2520
     ACCGCTCATT GTCAACAAAA GTATAATCAT ACCTTCAAAG ATTTTGTTCC CAACAACAAA      2580
     TGAATTTTTA TTGCACCCTT TCTCTGAGAA TTACGATCTT TTATTAGGAA GAAAACTTTT      2640
     AGCAGAAGCA AAAGCAACAA TAAGTTACCG CGATCAAGAG GTAACTCTTT ACAACAACAA      2700
     ATACAAATTA ATAGAAGGAA TAGCAACACA TGAACAGAGT CATTTTCAAA ATGTAAATAT      2760
     GATACCTGAC ACCATGCTCA GACAGCCAAA TAAAATTTCA CCCATTTTAG AATCAGACCT      2820
     ATACAGATTG GAACATTTAA ATAACGAAGA AAAACAAAGA TTGTGCGCAC TCCTGCAGAA      2880
     ATACCATGAC ATACAGTACC ATGAAGGTGA TAAGTTGACA TTTACTAATC AAACCAAACA      2940
     TACTATCAAT ACAAAGCACA ATCTACCACT TTACTCTAAA TACAGTTACC CACAGGCTTA      3000
     TGAACAGGAG GTCGAAAGCC AAATACAAGA TATGCTAAAT CAAGGTATTA TACGTACCAG      3060
     TAATTCACCT TACAATAGCC CCATCTGGGT GGTTCCAAAG AAACAAGATG CATCAGGCAA      3120
     ACAGAAATTT AGAATTGTAA TAGACTACCG AAAATTAAAT GAAATAACAG TAGGAGACAG      3180
     ACACCCAATC CCAAACATGG ACGAAATCTT GGGAAAATTG GGCAGATGTA ATTACTTCAC      3240
     AACTATAGAC TTGGCAAAGG GTTTCCACCA GATCGAAATG GATCCAGAAT CAGTTTCAAA      3300
     GACAGCCTTT TCTACCAAGC ACGGTCATTA TGAATATTTG CGCATGCCAT TCGGATTAAA      3360
     AAACGCGCCA GCCACCTTTC AACGGTGCAT GAATGATATT TTAAGACCAC TCTTAAACAA      3420
     ACACTGTCTT GTGTATTTGG ACGACATAAT TGTATTCTCG ACATCCCTTG ATGAACACCT      3480
     GCAATCGCTC GGACTAGTTT TCGAAAAATT AGCAAAAGCC AACCTTAAAT TACAACTTGA      3540
     CAAATGTGAG TTTCTCAAGC AAGAAACCAC ATTTTTAGGA CATGTTCTAA CACCAGATGG      3600
     AATAAAACCA AACCCTGAAA AAATTGAAGC CATTCAAAAA TATCCAATTC CCACTAAACC      3660
     AAAAGAAATA AAAGCTTTTC TTGGACTGAC AGGATATTAT CGTAAATTTA TTCCAAACTT      3720
     TGCAGACATA GCCAAACCCA TGACTAAGTG TTTAAAAAAG AACATGAAAA TTGACACTAC      3780
     CAACCCAGAA TATGACTCTG CATTTAAAAA ATTAAAATAT CTAATATCAG AAGACCCAAT      3840
     TCTTAAAGTA CCCGACTTTA CAAAGAAATT CACTTTAACC ACAGACGCAA GTGATGTCGC      3900
     TTTGGGGGCA GTACTGTCAC AAGATGGACA CCCACTTAGC TACATTAGCC GAACACTTAA      3960
     TGAACACGAA ATAAATTACA GCACAATTGA AAAAGAACTC TTAGCAATTG TATGGGCGAC      4020
     AAAGACTTTT CGACACTACC TACTTGGAAG ACACTTTGAA ATATCCAGTG ACCATCAACC      4080
     ATTGAGCTGG TTGTACCGTA TGAAAGACCC AAATTCAAAA CTGACCCGAT GGAGAGTAAA      4140
     ATTATCCGAA TTCGATTTTG ATATAAAATA TATAAAAGGA AAAGAAAATT GCGTGGCGGA      4200
     TGCTCTGTCC AGAATAAAAC TTGAGGAGAC ATATTTGAGC GAACAAACCC AACATAGTGC      4260
     AGAAGAGGAC AATAGTGATT TAATTTTTAT TACAGAAAGA CCTCTAAATA CATTTAACAG      4320
     ACAAGTTATA TTTTCAAAAG GACCACCAGA CATTAAAGTT ACGAAATATT TCAAAAAACA      4380
     CATCACCCAA ATATTTTACG ACATTATGAC CAGGGAAAAA GCCGAACAAT ATTTGATAGA      4440
     CCATTTTTGT GGTAAGAAAA GTGCGTTGTA TATTGAGAGT GACGCTGATT TCGAAGTCAT      4500
     TCAAGCCGCA CATAAATTAG CCATAAACAC CAAATATACA AAAATCCTGC GTAGCACGAT      4560
     TTTGTTAAAA AACATAACCA CTTATGCGGA ATTTAAGGAA TTGATCTTGA CTGCTCATGA      4620
     AAAACTTCTA CACCCAGGCA TACAGAAAAC TACTAAACTT TTCGGAGAAA CTTACTATTT      4680
     CCCTAATAGC CAGCTACTTA TTCAGAATAT AATAAATGAG TGCAGTATTT GCAATCTGGC      4740
     AAAAACAGAG CACCGAAATA CAGACATGCC AACGAAAACC ACACCCAAAC CAGAACATTG      4800
     CCGCGAAAAA TTCATGATAG ACATTTACTC ATCCGAAGGC AAACATTACG TTAGTTGCAT      4860
     AGACATTTAT TCGAAATTTG CCACATTAGA AGAAATAAAA ACAAAAGACT GGATAGAATG      4920
     CAAAAACGCG CTTATGCGCA TATTCAACCA GCTTGGCAAG CCAAAGTTAC TAAAGGCGGA      4980
     CAGAGACGGC GCATTTTCCA GTTTAGCCCT CAAGAGATGG CTGGAGAGTG AGGAAGTCGA      5040
     ATTGCAGCTT AACACAACAA AAACTGGTGT GGCGGACATA GAAAGACTAC ATAAAACAAT      5100
     TAATGAAAAG ATTCGCATAA TCAAAACATC CGATGACGAA GAAACCAAAT TGAGCAAAAT      5160
     GGAAACAGTA CTTAACATAT ACAATCATAA AACCAAACAC GACACCACTG GACAGACCCC      5220
     TGCACACATA TTTCTCTACG CTGGACAACC AATATTAGAT ACCCAACAAA ACAAAGAAAA      5280
     CAAAATAAAC AAAATAAATA ATGACAGAGT GGAGTACGAA GTCGACACAA GATACAGAAA      5340
     AGGTCCACTA CAGAAAGGCA AATTAGAAAA TCCTTTTAAG CCAACAAAAA ATGTGGAGCA      5400
     GACTGACTCT GATCATTATA AAATTACTAA TAGAAATAGA ATTACTCACT ACTACAAAAC      5460
     ACAATTCAAA AAACGAAAGA AAAATAATCA GCTCTCAATT TCACAGGCAC CTGGCACTTG      5520
     ATAACATTGC TGCTGATGCT GATCACAACA GTTCATGGAC AACAAATTGA AATTAATAAT      5580
     ATTGACACAA ACCACGGATA TCTCCTTTTT TCTGATAAAC CAGTCCAGAT ACCATCATCC      5640
     TTTGAACATC ATTGCTTGAG AATCAATTTA ACTGAAATAG ACACCATAGC TGATTATTTT      5700
     GAGCAAAGAC TACGTACCGA CTACCATGCA CCCCAGGTCA AATTTTTATA CAACAAAATG      5760
     AGAAGAGAAC TAGCTGGAAT AGCCTTGCGA CATAGAAATA AACGGGGACT TATTAACATT      5820
     GTAGGTTCAG TTTTTAAATA CCTATTTGGC ACACTTGACG AAAATGATCG AGTGGATATA      5880
     CAGAGGAAAC TTGAAACAAA CGCCCATAAC TCGGTAAATT TACATGAACT CAATGACGCT      5940
     ATTCAATTAA TAAATGACGG AATGCAAAAG ATACAGAATT ATGAAAACAA CAGCAACATC      6000
     ATTAACAGTC TTTTATATGA ACTCATGCAG TTTACAGAAT ACATAGAAGA TGTGGAAATG      6060
     GGAATGCAGC TTTCCAGACT CGGTCTATTT AATCCCAAAC TACTAAACTA CGATAAACTT      6120
     GAGAATGTAA ACAGCCAAAA TATTTTAAAC ATTAAAACAT CCACTTGGAT TAATTACAAT      6180
     GATAACCAAT TATTAATCAT ATCTCACATA CCTATTAACT TTTCATTAAT AAATACAGTA      6240
     AAAATAATCC CTTACCCAGA CTCGAACGGC TATCAGCTAG AATACACAGA CACACAATCA      6300
     TATTTTGAAA GAGAAAATAA AGTTTACAAT AACGAAAATA AAGAAATAAA CAATGAGTGT      6360
     GTCACCAACA TTATTAAACA TTTAAAACCA ATTTGTAATT TTGAGTCAAT CCACACAGAT      6420
     GAAATAATAA AATACATAGA ACCAAACACA ATTGTAACCT GGAATTTAAC CCAAACAAGT      6480
     CTCAAACAAA ATTGTCAAAA TTCATTTAAT AATATAAAAA TAAAAGGAAA CAAAATGATA      6540
     AAAGTAACCC AATGTAAAAT AGAAATCAAT AGCATAATTC TAAGTGAAAA TCTCTTTAAA      6600
     CCAGAAATAG ATTTGACACC ATTATACACA CCACTTAACA TAACAAAAAT AAAAACTGTT      6660
     AAACACAACG ACATTAATGA AATGATTTCA CAAAACAATA TTACACTTTA CATATTTATG      6720
     ACTACTGTCA TCATTATACT TATTTTATTG TACTTATATT TAAGATACGT ATCATTTAAC      6780
     CCATTCATGA TGCTGTATGC AAAACTAAAA TTAAGAAAAA ATCAAAATCA AAACACAGCA      6840
     CAACAAATAG AAATGGAAGA CGTTCCATTA CCCCTACTAT ATCCATCAAT CCCAGCCCAA      6900
     GTATAGGCTT CTCTTTAAGG GAAGGGAAGT GACATATTCA CATACAAAAC CACATAACGT      6960
     AGAGTAAACA TATTGAAAAG CCGCATACGT CAACAATAAG TGACCACCAT GCTAATGTGG      7020
     ATCAAATAAC AAAAATATCC ACTCTGCATT TTGACACCCC CATACTGTAT GCCATCTGCG      7080
     CAGTATGCAT TCTAATAAAC AAATTCTTTG ACAGCGGCAC TTAGCCATTC TTGTAAACAA      7140
     ATCTTAAAGT CTGCCTGCTC TCTCTGAGGC TTCTCCTCCA CTTAAGAATC CAAGAGCAAT      7200
     GCTCTCCCAA AAACACTAAC ATATTCTTTA AGCAAGCACA GAGGCTTCTC CTCATTTTCA      7260
     CTTTCATTTG ATTTTCAGTC TTAAGCTGAA CGTTAATCAA TAAACAACAC AATCGATACC      7320
     GAAATTTTGA TTCGTTTTAT TTTGGCAAAA CTCAATTTTC AGCGTTGGTC TTAGTTCATA      7380
     TTCGGAACGG TCCATTTAAT AGACTCAAAA CTATTTATTG CAACCATTTA TTTGCAATT       7439
//
ID   DMTN1731   standard; DNA; INV; 4648 BP.
XX
AC   X07656;
XX
DR   FLYBASE; FBgn0000007; 1731.
XX
FT   source          X07656:1..4648
FT   SO_feature      five_prime_LTR ; SO:0000425:1..336
FT   SO_feature      three_prime_LTR ; SO:0000426:4313..4648
FT   SO_feature      TATA_box ; SO:0000174:110..116
FT   SO_feature      primer_binding_site ; SO:0005850:342..352
FT   SO_feature      CDS ; SO:0000316:431..1252
FT                   /db_xref="FLYBASE:FBgn0020768; 1731\gag"
FT                   /db_xref="REMTREMBL:CAA30502"
FT                   /protein_id="CAA30502.1"
FT                   /translation="MSNLYQIDKLEDGSYETWSIQMRSVLVHACLWKVVSGESVKPEVD
FT                   TGGAWQSQDEKALATIILSVKSSQLGYVKGCLTAAEAWKVLQDVHQPKGPLRTVMLYKK
FT                   LLSKRLLEGQSISSHIKEFKEIFDALDAVEIGITEKLRSVVLLSSLPESFENFVVAIET
FT                   RDDVPLFDALCIKLIEEDTRRGGAEQQREKQTESAKAFTAVHKPQAPAREARPSAKKRK
FT                   DVVCYNCGERRHFKANCRREKVNKESATQEQCSLLNALDSGGFWQNTVVSR"
FT   SO_feature      CDS ; SO:0000316:1203..4151
FT                   /db_xref="FLYBASE:FBgn0012032; 1731\RTase"
FT                   /db_xref="REMTREMBL:CAA30503"
FT                   /protein_id="CAA30503.1"
FT                   /translation="MRWIVVVFGKTQWCLDSGATSHMCCDRSVFTEFEEHTEKISLAGN
FT                   GFLLAKGIGTVKLKTDLCTLVLNNVLFVPDLNGNFMSVSRAAQYKCFVNFGPHYADVIQ
FT                   EGERILRVMRAGNLYMFQGKHNSCFAAVDADGSLWHKRNGHLNTSSLQEMVRKKMVYGV
FT                   EKVVFKPDAVCKTCMLAKIHVQPFPKTTRSRAEELLDMIHSDLCGPFSTPSLAGSKYFL
FT                   TFIDDKSRRIFVYFLRKKDEVFTKFVEFKKLVERQTGRKIKCIRSDNGGEFVNNVFDDY
FT                   LKAHGIARQLTIPHTPQQNGVAERANRTLVEMARCMLLQSELGEALWAEAINTAVYLRN
FT                   RSTSRALQSKTPMEEWTGKIPAVSHLRVFGAIAVALDKGVHKGKFESKGKEYRMIGYSI
FT                   AAKGYRLFDKEKRCVIEKQDVLFDESGSLVNHGNTIEFQFPATDDPEPQSDSNAREGDD
FT                   TEPVGSSDDYESAAEAEEAEVHVGPGRPKIVRTGRPGRPKKQYNVLGVLMASDVEIPKS
FT                   YEEAINSQYSAKWEEAMGLEYKALLANETWKLADLPRNRRCVACKWVYSLKRDVSGRIE
FT                   RFKARLVAKGCSQKFGVDYFETFSPVCRLESVRLILALAAEMQLYLHHMDVCTAYLNSE
FT                   LKDTVYMKQPQGFTDAANPDQVLLLRKAIYGLKQSGREWNSKLDGVLKDLGFKACNHEP
FT                   CLYQQSGQGNLMLILVYVDDLILACQSREDMEDLKAKISESFECTDKGPLHLFLGMEVQ
FT                   RDGDLGEITLGHSQYIKELLRDYGSENCRPATTPLDAGHQVLCAGEQCQKVDAGQYQST
FT                   IGELMWLGLTTRPDMLHSVAKLAQRNQDPHSEHMVAVKHILRYLASTVDVKLHYQKCGQ
FT                   AFTGFVDADWGGDRLDRKSYTGYVFFLSGGPVSWRSEKQQSVALSSTEAEYMALTTACK
FT                   EAIALRRLIVEIVCGDLKTPTVMHGDNLKCAAQLAKNPVHHSRTKHIDIRYH"
XX
CC   Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 4648 BP;  1316 A; 880 C; 1268 G; 1184 T; 0 other;
     TGTTGAATAT AGGCAATGCC CACATGTGTG TTGAATATAG GCAATTTCCA CATGTGCATA        60
     TGTAATTTTG TATGAGAACA TACATACATA CACATGAACT GTATGTATGT ATATATATTA       120
     GCAAATAAGC AGCCGCATGA AGGTGGCATT TTTATGTGTA TCAGTTTCAG TTTCAAATAA       180
     AACTTCTTCG TGTTCGGACA CGCGGCTCAA GACTTTTTAT TTCGCGTTTA CTCTTTCAGC       240
     CTTTGCTCTC AATTCGCTGA GTTTGGGTGA AGATTAGGAT CTTCCCATTA TGATTGTCAG       300
     TGTTCCACAC TTGGAGCACC TTTTCAATAA ACAACAGGTT AATGGGCCCA GCGCCCTAGG       360
     AGCTGCCTAA AGGAGAAACG TGTAGTGAAA CTCAGGAGTT AGATTTTGGA GTCTACTCAA       420
     GATTGCCGGA ATGAGTAACC TGTATCAGAT CGATAAGCTG GAGGATGGAT CCTATGAAAC       480
     GTGGAGCATC CAGATGCGTT CAGTGTTGGT GCACGCATGT TTGTGGAAGG TGGTTTCAGG       540
     AGAGTCCGTG AAACCTGAGG TTGATACTGG AGGTGCTTGG CAATCCCAAG ATGAAAAAGC       600
     ATTGGCCACG ATCATCTTGA GTGTGAAGTC TTCGCAACTT GGTTATGTAA AAGGGTGTCT       660
     CACTGCGGCT GAGGCATGGA AAGTTTTACA GGATGTCCAC CAGCCGAAAG GGCCGTTACG       720
     AACGGTCATG CTGTATAAGA AGTTGCTGAG CAAACGTCTG TTGGAAGGGC AGAGTATATC       780
     GTCACATATT AAAGAATTTA AGGAAATCTT TGATGCCCTT GATGCGGTGG AAATTGGTAT       840
     CACCGAGAAA TTGCGCAGTG TTGTTTTGCT GTCGAGCCTT CCAGAGAGTT TCGAGAATTT       900
     CGTTGTCGCC ATTGAGACGC GCGACGACGT GCCGCTTTTC GATGCTCTAT GTATAAAGCT       960
     GATCGAGGAA GACACGAGAA GGGGAGGAGC GGAGCAGCAG AGAGAAAAAC AAACGGAGAG      1020
     CGCAAAGGCA TTTACTGCAG TACATAAGCC ACAGGCGCCG GCGAGAGAAG CTCGGCCGAG      1080
     CGCAAAGAAG AGGAAAGACG TAGTTTGTTA TAACTGTGGA GAGCGTAGGC ATTTTAAAGC      1140
     GAACTGTCGT CGCGAGAAAG TAAACAAAGA GAGCGCGACA CAAGAACAAT GCAGTTTGTT      1200
     AAATGCGCTG GATAGTGGTG GTTTTTGGCA AAACACAGTG GTGTCTCGAT AGCGGGGCTA      1260
     CCAGTCACAT GTGCTGTGAC AGAAGTGTTT TTACTGAGTT TGAAGAGCAC ACTGAAAAAA      1320
     TTAGTCTTGC TGGAAATGGA TTCCTACTAG CAAAGGGCAT AGGAACAGTG AAGCTGAAGA      1380
     CTGATTTATG TACTCTGGTA TTGAATAACG TACTCTTCGT CCCAGATTTG AACGGCAACT      1440
     TTATGTCAGT CAGCCGTGCA GCTCAGTATA AATGTTTTGT CAATTTTGGA CCACATTACG      1500
     CTGACGTCAT TCAGGAAGGC GAGCGAATAC TGCGTGTAAT GAGAGCTGGT AATTTATATA      1560
     TGTTTCAAGG GAAACATAAC AGTTGTTTTG CGGCCGTTGA TGCTGATGGT TCACTATGGC      1620
     ATAAAAGGAA TGGCCATTTG AATACAAGCA GCCTACAGGA GATGGTGAGG AAGAAGATGG      1680
     TGTACGGTGT TGAAAAGGTC GTTTTCAAAC CAGACGCAGT ATGCAAGACG TGCATGCTGG      1740
     CAAAAATCCA TGTGCAACCA TTTCCGAAGA CAACGAGGAG CAGAGCTGAG GAGCTGTTGG      1800
     ATATGATCCA TTCAGACCTG TGCGGGCCAT TTAGCACACC GTCACTTGCT GGATCAAAGT      1860
     ACTTTCTCAC TTTCATAGAC GACAAGTCCA GGCGGATTTT TGTATATTTC TTGCGGAAGA      1920
     AGGACGAAGT CTTCACTAAG TTTGTCGAGT TTAAGAAACT GGTCGAGCGA CAAACAGGTA      1980
     GAAAGATAAA ATGTATCCGG AGCGATAATG GTGGTGAGTT CGTCAATAAT GTTTTTGATG      2040
     ACTATTTAAA GGCACATGGG ATCGCTAGAC AGCTGACTAT TCCACACACT CCCCAACAAA      2100
     ATGGAGTTGC AGAACGAGCC AACCGCACGC TAGTAGAAAT GGCTAGGTGC ATGTTGCTGC      2160
     AATCGGAGTT GGGTGAGGCT CTATGGGCTG AGGCGATAAA CACTGCGGTG TATCTGAGGA      2220
     ACCGATCAAC GAGCAGAGCA TTACAAAGCA AAACCCCTAT GGAAGAGTGG ACCGGAAAAA      2280
     TACCAGCAGT GAGCCACTTG AGGGTTTTTG GTGCCATAGC AGTGGCATTG GACAAAGGAG      2340
     TCCATAAAGG CAAATTCGAA TCCAAAGGAA AGGAATATCG TATGATTGGA TATTCAATAG      2400
     CTGCTAAGGG GTACCGTCTG TTTGACAAAG AGAAGCGGTG TGTGATCGAG AAGCAAGATG      2460
     TCCTTTTTGA TGAGTCTGGT AGTTTGGTAA ATCATGGAAA TACCATTGAG TTCCAGTTTC      2520
     CCGCAACTGA TGACCCGGAG CCGCAGAGTG ATTCGAATGC ACGGGAAGGT GACGATACAG      2580
     AACCCGTGGG CAGCAGCGAC GACTATGAGA GTGCAGCTGA GGCAGAAGAA GCTGAAGTAC      2640
     ATGTGGGGCC TGGACGGCCA AAGATTGTTC GGACGGGCAG ACCAGGGCGC CCGAAGAAGC      2700
     AATACAATGT ACTTGGCGTG TTGATGGCTA GCGACGTCGA AATTCCCAAG TCCTATGAGG      2760
     AGGCCATCAA TTCGCAGTAT TCTGCAAAGT GGGAAGAGGC AATGGGCCTG GAGTACAAGG      2820
     CGCTACTTGC AAATGAGACA TGGAAGCTGG CTGACTTACC AAGAAATCGC CGGTGTGTGG      2880
     CTTGCAAGTG GGTGTATTCC CTGAAACGAG ACGTCTCTGG TAGAATTGAG CGCTTCAAGG      2940
     CACGACTAGT AGCAAAGGGG TGTTCGCAGA AGTTCGGAGT GGACTACTTC GAGACTTTTT      3000
     CACCCGTGTG CAGGCTCGAG AGTGTGAGGC TCATTTTGGC ATTGGCAGCA GAGATGCAAT      3060
     TGTACTTGCA TCACATGGAC GTATGCACGG CGTACTTAAA TAGCGAGCTA AAGGATACTG      3120
     TGTACATGAA GCAGCCCCAA GGGTTCACAG ATGCTGCTAA TCCCGACCAG GTGTTATTGC      3180
     TGAGGAAGGC AATATACGGC TTGAAGCAGT CAGGCAGAGA GTGGAACTCC AAGCTCGACG      3240
     GTGTTCTAAA AGACTTGGGA TTTAAGGCCT GTAATCATGA ACCATGTCTT TATCAGCAAA      3300
     GTGGTCAAGG TAATCTGATG CTCATCTTAG TATATGTTGA TGATTTAATT CTAGCGTGCC      3360
     AGTCAAGAGA AGATATGGAG GATCTGAAAG CCAAGATTTC AGAGTCTTTC GAGTGCACGG      3420
     ACAAGGGTCC ACTGCATTTG TTCTTAGGCA TGGAGGTGCA ACGAGATGGC GACCTTGGAG      3480
     AAATCACTTT GGGCCATTCG CAATATATCA AGGAACTATT GCGGGATTAT GGCAGCGAGA      3540
     ACTGTAGACC AGCGACGACA CCTTTGGATG CAGGGCATCA AGTTTTGTGC GCGGGTGAGC      3600
     AGTGCCAGAA GGTCGACGCA GGGCAGTATC AGTCTACAAT TGGTGAGCTA ATGTGGCTTG      3660
     GGCTTACTAC CAGACCAGAC ATGCTACATT CGGTGGCGAA GTTGGCTCAG AGGAATCAGG      3720
     ACCCGCATTC TGAGCACATG GTGGCTGTGA AGCACATCCT CCGGTACTTG GCGTCAACTG      3780
     TGGACGTCAA GCTGCATTAT CAAAAGTGCG GTCAGGCATT TACCGGCTTT GTGGATGCAG      3840
     ATTGGGGAGG CGACCGTTTG GACCGAAAGT CATACACAGG GTATGTGTTT TTCCTGTCTG      3900
     GCGGACCAGT ATCATGGAGG TCCGAGAAGC AGCAGAGCGT GGCGTTGAGC AGTACTGAAG      3960
     CCGAGTATAT GGCTCTGACC ACGGCTTGCA AGGAAGCTAT AGCTTTACGA AGGCTAATAG      4020
     TGGAGATCGT ATGCGGTGAT CTGAAGACCC CGACGGTTAT GCATGGCGAC AACCTGAAGT      4080
     GCGCAGCACA GTTAGCGAAG AACCCGGTTC ATCACTCTAG GACGAAGCAC ATCGACATTC      4140
     GATATCATTA GAGAAGTCAT GAAAGAGGGT CACGTTGTGT TAGAGTACAC TTCTACGAAT      4200
     GAGATGATAG CAGACATTAT GACAAAGAAT CTTTCAAAGG GAAAGCATAA TGGGTTTATG      4260
     AAAATGTTAA ATTTGTTTTA ATTTTTGTAA ACATGTTGGC ATTGAGGAAG GCTGTTGAAT      4320
     ATAGGCAATG CCCACATGTG TGTTGAATAT AGGCAATTTC CACATGTGCA TATGTAATTT      4380
     TGTATGAGAA CATACATACA TACACATGAA CTATATGTAT GTATATATAT TAGTAAATAA      4440
     GCAGCCGCAT GAAGCTGGCA TTTTTATGTG TATCAGTTTC AGTTTCAAAT AAAACTTCTT      4500
     CGTGTTCGGA CGCTCGGCTC AAGACTTTTT ATTTCGCGTT TACTCATTCG GCCTTTGCTC      4560
     TCAATGCGCT GAGTTTGGGT GAAGATTAGG ATCTTCCCAT TATGGTTGTC AGTGTTCCAC      4620
     ACTGGGAGCA CCTTTTCAAC AAACCACA                                         4648
//
ID   DMIS297    standard; DNA; INV; 6995 BP.
XX
AC   X03431;
XX
DR   FLYBASE; FBgn0000005; 297.
XX
FT   source          X03431:1..6995
FT   SO_feature      five_prime_LTR ; SO:0000425:1..414
FT   SO_feature      three_prime_LTR ; SO:0000426:6582..6995
FT   SO_feature      TATA_box ; SO:0000174:276..282
FT   SO_feature      TATA_box ; SO:0000174:6857..6863
FT   SO_feature      polyA_signal_sequence ; SO:0000551:304..309
FT   SO_feature      polyA_signal_sequence ; SO:0000551:6885..6890
FT   SO_feature      primer_binding_site ; SO:0005850:414..431
FT   SO_feature      RR_tract ; SO:0000435:6571..6581
FT   SO_feature      CDS ; SO:0000316:803..2047
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044338; 297\gag"
FT                   /db_xref="SWISS-PROT:P20828"
FT                   /protein_id="CAA27159.1"
FT                   /translation="MSQPIIALSDINLAEARRQLKDIMPFKGDPETLHTFISRVDYVIS
FT                   LYQTNDVRQQRILLGAIERNLDGQITRSLGLPNVEDWPTLKARLIAEFKIQTPNYKLLE
FT                   NFRETPYRGSLRAFCEEAERRRQLLISKLHLEGNQSDFLIYIQGIKESIKILIRKLPIQ
FT                   LFTILAHHDITDLRSLITIAQNEGIYEEHINFEFYEKPEYRNKNSNSNQNSKTQKFNTN
FT                   VQTQNRPSYSQYSQPFQPNFNQYIQPFRPSYTQQITNNPPMWHAPNYFRPNQYINPQPI
FT                   IQKNHFQQYPNKAQFPQTTHFRGNTYPRLQQPSTYKNTNFPITKRLRPSDSEQTKMSID
FT                   EIRFQDAHEFEQVQPNYYEQQYFNQNQYNPYQNHSFINEGQQQVQFVQINNKQNQNNSE
FT                   LNENFRLTVPENTNT"
FT   SO_feature      CDS ; SO:0000316:<1999..5178
FT                   /db_xref="FLYBASE:FBgn0027622; 297\pol"
FT                   /db_xref="SWISS-PROT:P20825"
FT                   /protein_id="CAB57796.1"
FT                   /translation="TKRKFSVNSSGKYEYIKIVYKGRSYKCLLDTGSTINMINENIFCL
FT                   PIQNSRCEVLTSNGPITLNDLIMLPRNSIFKKTEPFYVHRFSNNYDMLIGRKLLKNAQS
FT                   VINYKNDTVTLFDQTYKLITSESERNQNLYIQRTPESIASSDQESIKKLDFSQFRLDHL
FT                   NQEETFKLKGLLNKFRNLEYKEGEKLTFTNTIKHVLNTTHNSPIYSKQYPLAQTHEIEV
FT                   ENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPI
FT                   PNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA
FT                   PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDK
FT                   CEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNY
FT                   ADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNL
FT                   ALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDH
FT                   QPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSRIKIEENHHSEATQ
FT                   HSAEEDNSNLIHLTEKPINYFKKQIIFIKSDKNKVEHSKIFGNSITTIQYDVMTLEKAK
FT                   QILLDHFIHRNITIYIESDVDFEIVQRAHIEIVNTTYTKVIRSLFLLKNVGSYAEFKEI
FT                   ILQSHEKLLHPGIQKMTKLFKENHFFPNSQLLIQNIINECNICNLAKTEHRNTKMPLKI
FT                   TPNPEHCREKFVVDIYSSEGKHYISCIDIYSKFATLEQIKTKDWIECRNALMRIFNQLG
FT                   KPKLLKADRDGAFSSLALKRWLEEEEVELQLNTAKNGVADVERLHKTINEKIRIINSSD
FT                   DEEVKLSKIETILYTYNQKIKHDTTGQRPAQIFLYAGHPILDTQKIKEKKIEKINEDRR
FT                   EFNIDTNYRKGPLQKGKLENPFKPTKNVEQTDPDHYKITNRNRVTHYYKTQFKKQKKNN
FT                   KLSISQAPGTR"
FT   SO_feature      CDS ; SO:0000316:5145..6560
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0027623; 297\env"
FT                   /db_xref="SWISS-PROT:P20829"
FT                   /protein_id="CAB57797.1"
FT                   /translation="TLNFTGTWYPITLLFILITAVHGQQIQINNIDTNHGYLLFSDKPV
FT                   QIPSSFEHHSLKINLTEIDIVVDYFEQRLRTDYHAPQINFLYNKIKRELARITLKHRNK
FT                   RGFINIVGSGFKYLFGTLDENDRVEIQKKLEINVHNSVKLHELNDAIRLINDGMQKIQN
FT                   YENNHTIIDSLLFELMQFTEYIEDLEMAMQLSRLGLFNPKLLNYDKLENVNSQNILNIK
FT                   TSTWINYNDNQVLIISHIPIYLSLISTIKIIPYPDSNGYQLDYTDTQSYFEKENKVYNT
FT                   ENKEVKNECVTNIIKHLNPICNFKPVHTNEIIKYIEPNTIVTWNLTQTILNQNCQNSIN
FT                   KIKIEGNKMIRVTQCKIEINNINFSETLLEPEIDLTPLYTPLNITKIKIVKHNDIIEMI
FT                   SENNITLYIQMIIVIIALILLYSYLRYVSFKPFMMLYAKLKIRKNQNQNTPQQTEIEEI
FT                   PFPTLYPSIPAQV"
XX
CC   Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 6995 BP;  2811 A; 1356 C; 972 G; 1856 T; 0 other;
     AGTGACGTAT TTGGGTGGTC CAAACCAGCC ACTTCCATTA TTTCAAAGAA ATCAGTAATG        60
     CACTCTAGTA ATTTTCCATA ACTGTATCCC AGCTGCGCAG ACTCGTTTAT CTTTTGCAGC       120
     GCAGCGTTCT TTGTAAACAT CCTAAAGACC TGCCTAAGCA GATTTGACTG CCCTCTTTCA       180
     ACGCTACCTA ATCTTAAGAA CCCAAGAGCG AGGCTCTCCC GAAATACAAA TATTGTTCAA       240
     ATACTGAGGC TTCTCCTCAA TCCAATTTGC ATTTGATTTT TAGTCTTAAG CTGAGATCCA       300
     AAGAATAAAG TCGTGAAACT ATTTCTCCTA AAAACTATTT TTTATTTCTT GGCGTTGTCC       360
     TTAGTCAACT GACGGGACAT TAGTTCGACT CATAAATAAA ACAACAATTT TACTGGCGCA       420
     GTCGGTAGGA TACAAAAGTA TCCGAAAAAA AAGAACCTTC GAATGGAAAA TAAGTTAAAT       480
     TTTATAGTCC TGTGCTCGAA ACATCTCCCA AAATAAATTC GTGAAAACTC TTCAACTTCA       540
     ATTATAATTC CAATTCGGTT ATCCAATAAT AAGTGGAAGT GAAATACGAA ACAAAAATAT       600
     TAAGTCCAAA GGCAACTAAG TTTTAAAACC AACATATAAA AATAAAAAAT TAAAACAATA       660
     TAGAATTTTA ATAATACAAC ACAAAAATTT ACAAAACAAA AAAACAAACA AGTGAAACTA       720
     GAAAGCTTAA AAATAATAAT AACATTGAAT CCGAAACAAA ACAAAAAAAT AAAACACAAA       780
     AGTTAAAAAT TTTACAATAA AAATGTCACA ACCAATTATT GCGCTGAGCG ACATAAACCT       840
     TGCCGAAGCC CGTCGGCAGC TTAAAGACAT TATGCCATTC AAGGGTGATC CAGAAACCCT       900
     TCACACCTTT ATCAGCAGAG TGGATTACGT AATTTCGCTC TACCAAACAA ATGATGTCCG       960
     ACAACAGAGG ATTCTACTGG GAGCCATCGA AAGGAACTTG GACGGACAAA TTACACGATC      1020
     TTTGGGACTT CCGAACGTCG AAGATTGGCC TACCCTTAAA GCAAGACTCA TCGCGGAATT      1080
     TAAAATTCAA ACACCAAACT ACAAACTTCT GGAGAACTTC AGGGAGACAC CATACAGAGG      1140
     AAGCCTAAGA GCATTCTGCG AAGAAGCGGA GAGACGACGT CAATTACTAA TTTCGAAACT      1200
     ACACCTGGAA GGTAACCAAT CGGATTTTCT TATTTATATT CAGGGTATTA AAGAATCTAT      1260
     TAAGATACTG ATAAGGAAAC TACCAATACA ATTATTCACT ATTTTAGCCC ATCACGATAT      1320
     TACAGACTTA AGATCCTTAA TTACCATTGC ACAAAATGAG GGAATTTATG AAGAACACAT      1380
     TAATTTTGAA TTTTATGAAA AACCAGAATA TCGTAATAAA AATTCAAATT CTAACCAGAA      1440
     TTCGAAAACA CAAAAATTCA ATACAAATGT TCAAACTCAA AATCGACCAA GTTACTCACA      1500
     ATATTCCCAA CCCTTCCAAC CTAATTTTAA TCAATACATT CAACCATTTA GACCTAGCTA      1560
     TACACAGCAG ATAACTAACA ACCCACCCAT GTGGCACGCA CCTAATTATT TCAGACCCAA      1620
     CCAATACATA AACCCACAAC CCATTATTCA AAAAAATCAT TTCCAACAAT ATCCCAACAA      1680
     AGCCCAATTT CCCCAAACAA CGCATTTTAG AGGAAATACA TACCCTCGAC TACAACAACC      1740
     CTCTACATAT AAAAATACTA ACTTCCCGAT TACTAAACGA CTAAGACCAT CGGACAGTGA      1800
     ACAAACTAAA ATGTCTATTG ACGAAATTAG ATTCCAAGAC GCGCATGAAT TCGAACAAGT      1860
     CCAACCTAAT TATTACGAGC AACAGTATTT TAACCAAAAT CAATACAATC CGTATCAAAA      1920
     TCATAGCTTC ATTAATGAAG GGCAACAACA AGTTCAATTT GTACAAATTA ATAACAAACA      1980
     AAACCAAAAT AATTCTGAAC TAAACGAAAA TTTTCGGTTA ACAGTTCCGG AAAATACGAA      2040
     TACATAAAAA TAGTATACAA AGGGCGTTCA TACAAATGCC TTCTAGACAC AGGATCAACA      2100
     ATTAATATGA TCAATGAAAA TATATTTTGT CTTCCCATTC AAAATAGTAG ATGTGAAGTT      2160
     TTAACATCAA ATGGCCCTAT TACCTTGAAC GACTTGATTA TGTTACCCAG AAATAGTATT      2220
     TTCAAAAAAA CCGAACCATT TTATGTGCAC AGATTTTCTA ATAATTACGA TATGCTAATT      2280
     GGCAGAAAAT TGTTGAAAAA TGCTCAATCA GTTATTAATT ACAAAAATGA TACAGTTACC      2340
     CTTTTTGATC AAACATACAA ATTAATTACT TCAGAATCCG AAAGAAACCA AAATTTGTAT      2400
     ATCCAAAGGA CACCAGAATC AATTGCAAGC TCAGATCAGG AATCAATAAA AAAATTAGAT      2460
     TTTTCACAGT TTCGATTAGA TCACCTAAAT CAGGAGGAAA CTTTTAAGTT AAAAGGCTTG      2520
     TTAAATAAAT TTAGAAATCT TGAATATAAG GAGGGAGAGA AATTAACATT TACAAATACA      2580
     ATTAAACACG TACTAAATAC AACACATAAC TCCCCAATTT ATTCGAAACA ATACCCACTT      2640
     GCGCAAACAC ACGAAATCGA AGTAGAAAAC CAAGTACAGG AAATGCTGAA TCAGGGATTA      2700
     ATTAGGGAAA GTAATTCTCC ATACAATAGT CCTACTTGGG TCGTACCAAA GAAACCGGAT      2760
     GCTTCTGGTG CAAATAAGTA CAGGGTAGTA ATTGATTATA GAAAGCTAAA TGAAATAACC      2820
     ATACCTGACA GATATCCAAT TCCAAATATG GACGAAATTC TTGGCAAACT GGGTAAATGC      2880
     CAATATTTTA CAACGATCGA TCTGGCAAAG GGATTTCATC AAATAGAAAT GGACGAAGAA      2940
     TCAATTTCTA AAACTGCATT CTCCACAAAA AGCGGTCATT ACGAATACCT TCGAATGCCA      3000
     TTTGGCCTTA GGAATGCACC CGCTACTTTT CAAAGGTGCA TGAATAATAT CCTTCGACCG      3060
     TTGCTTAACA AACACTGTTT GGTGTATCTG GATGATATTA TAATTTTTTC AACATCCCTT      3120
     ACAGAACATT TAAATTCAAT ACAATTAGTT TTTACAAAGC TTGCAGATGC AAATTTAAAA      3180
     TTGCAACTAG ACAAATGTGA GTTCTTAAAA AAGGAAGCTA ACTTTCTTGG TCACATAGTT      3240
     ACCCCTGATG GTATTAAACC AAATCCTATT AAAGTTAAAG CCATAGTTTC ATACCCAATT      3300
     CCGACAAAAG ATAAAGAGAT AAGAGCTTTC CTTGGATTAA CAGGTTATTA TCGCAAATTT      3360
     ATTCCAAATT ACGCAGACAT AGCAAAACCC ATGACCAGCT GCTTAAAAAA AAGGACAAAG      3420
     ATAGATACAC AAAAACTTGA GTACATAGAG GCATTCGAAA AACTTAAGGC TTTGATAATT      3480
     CGTGACCCAA TTTTACAATT ACCTGATTTT GAAAAGAAAT TTGTTTTAAC CACAGATGCA      3540
     AGTAACTTGG CCCTCGGGGC TGTCCTTTCT CAAAACGGTC ATCCTATATC TTTTATTAGT      3600
     AGAACACTTA ACGATCACGA ATTAAATTAC AGTGCTATCG AAAAAGAATT ACTTGCCATA      3660
     GTTTGGGCCA CAAAAACTTT TCGACATTAT TTACTAGGAC GACAATTTCT CATTGCCAGT      3720
     GACCATCAAC CTCTTAGATG GCTTCATAAC TTAAAGGAAC CAGGTGCTAA GTTAGAAAGA      3780
     TGGAGAGTTA GATTAAGCGA ATACCAATTT AAAATAGATT ATATTAAAGG GAAAGAAAAT      3840
     TCAGTTGCCG ATGCATTATC AAGAATTAAA ATTGAAGAAA ATCATCATAG TGAAGCTACT      3900
     CAACATAGTG CAGAAGAGGA CAATAGCAAC CTTATTCATT TAACAGAAAA ACCAATAAAT      3960
     TATTTCAAAA AACAAATAAT CTTTATTAAA TCCGATAAAA ATAAAGTAGA GCATTCAAAA      4020
     ATATTCGGTA ACTCCATTAC CACAATTCAA TATGACGTAA TGACACTTGA AAAGGCCAAA      4080
     CAAATTTTAC TCGATCACTT TATCCATAGA AACATTACCA TTTATATTGA GAGCGATGTA      4140
     GATTTTGAAA TCGTTCAAAG AGCACACATA GAAATTGTTA ATACCACCTA CACAAAAGTA      4200
     ATTCGCAGTC TTTTCCTATT AAAGAACGTT GGTTCATACG CCGAATTCAA AGAAATCATA      4260
     CTTCAATCAC ATGAAAAACT TTTACACCCT GGTATACAGA AAATGACAAA ATTATTTAAA      4320
     GAAAATCACT TCTTTCCAAA TAGCCAACTA TTAATTCAGA ATATAATAAA CGAATGCAAC      4380
     ATATGCAATT TGGCCAAAAC AGAACATAGA AACACCAAAA TGCCTTTAAA AATCACACCC      4440
     AACCCGGAAC ATTGCCGAGA AAAATTTGTA GTAGATATTT ATTCATCTGA GGGAAAACAT      4500
     TACATCAGTT GCATTGATAT TTATTCTAAA TTCGCTACAC TTGAGCAAAT TAAAACTAAG      4560
     GATTGGATAG AATGCAGAAA CGCATTAATG CGCATTTTTA ATCAACTAGG AAAACCCAAA      4620
     TTATTAAAGG CAGACAGAGA CGGAGCTTTC TCCAGTTTAG CTTTAAAGCG ATGGCTTGAA      4680
     GAAGAAGAAG TCGAATTACA GCTCAATACA GCAAAAAACG GAGTAGCAGA CGTCGAAAGA      4740
     TTACACAAAA CAATAAATGA AAAAATTCGT ATAATCAATT CATCTGATGA TGAAGAAGTA      4800
     AAATTAAGCA AGATAGAAAC AATCCTCTAC ACATACAACC AAAAAATTAA ACATGACACT      4860
     ACTGGACAGA GACCTGCTCA AATTTTCTTA TACGCTGGGC ATCCCATATT AGACACTCAA      4920
     AAAATTAAAG AGAAGAAAAT AGAGAAAATA AATGAAGACA GACGGGAATT TAATATTGAC      4980
     ACTAATTACA GAAAAGGTCC ACTACAGAAA GGCAAATTAG AAAACCCATT TAAACCAACC      5040
     AAAAATGTAG AACAGACAGA CCCTGACCAT TACAAAATCA CTAATAGAAA TAGAGTTACG      5100
     CACTACTACA AAACACAATT CAAAAAACAA AAGAAAAATA ATAAACTCTC AATTTCACAG      5160
     GCACCTGGTA CCCGATAACA CTATTGTTTA TACTGATCAC AGCTGTTCAT GGACAACAAA      5220
     TTCAAATTAA TAATATTGAC ACCAACCACG GATATCTCCT TTTTTCTGAT AAGCCAGTAC      5280
     AGATACCATC CTCCTTTGAA CATCACTCCT TAAAAATCAA TTTAACTGAA ATAGACATCG      5340
     TGGTTGACTA TTTTGAGCAA AGACTACGAA CCGATTACCA TGCACCCCAG ATCAATTTTT      5400
     TATACAATAA AATAAAAAGA GAACTAGCCA GAATAACCCT GAAACATAGA AACAAACGGG      5460
     GTTTTATTAA CATTGTGGGT TCAGGTTTTA AATACCTATT TGGAACACTA GATGAAAATG      5520
     ATCGAGTCGA AATACAGAAA AAACTTGAAA TCAACGTCCA TAACTCAGTA AAATTACATG      5580
     AACTCAACGA CGCCATACGA TTGATAAATG ACGGAATGCA AAAAATACAG AATTATGAAA      5640
     ATAACCACAC CATCATTGAC AGTCTTTTGT TCGAACTAAT GCAGTTTACG GAATACATAG      5700
     AAGATTTGGA AATGGCTATG CAGCTTTCCA GACTTGGACT GTTTAACCCC AAATTACTAA      5760
     ACTACGACAA ACTTGAAAAT GTGAACAGCC AAAACATTTT GAACATTAAA ACATCCACTT      5820
     GGATTAACTA CAATGATAAC CAAGTATTAA TCATATCCCA CATACCCATT TACCTTTCAC      5880
     TAATAAGCAC AATTAAAATA ATTCCTTACC CAGACTCCAA CGGCTATCAG CTAGATTACA      5940
     CAGACACACA ATCATATTTT GAAAAAGAAA ATAAAGTTTA TAATACCGAA AATAAAGAAG      6000
     TAAAAAATGA ATGTGTCACC AATATTATTA AACACTTAAA TCCAATTTGT AATTTTAAGC      6060
     CAGTACACAC GAACGAAATA ATAAAATACA TAGAACCAAA CACAATTGTA ACTTGGAACT      6120
     TAACCCAAAC AATTCTTAAC CAAAATTGCC AAAATTCAAT TAATAAAATA AAAATAGAAG      6180
     GAAACAAAAT GATAAGAGTA ACGCAATGCA AAATAGAAAT CAATAATATA AATTTTAGTG      6240
     AAACTCTGTT AGAACCAGAA ATAGATTTGA CACCACTATA CACACCACTT AATATAACAA      6300
     AAATAAAAAT TGTAAAACAC AACGACATTA TTGAGATGAT TTCAGAGAAC AATATTACAC      6360
     TTTACATACA AATGATCATT GTAATAATCG CACTAATTTT GTTGTACTCA TATTTAAGAT      6420
     ATGTATCATT TAAACCATTT ATGATGTTGT ATGCAAAACT TAAAATAAGA AAAAATCAAA      6480
     ATCAAAACAC ACCACAACAA ACAGAAATAG AAGAAATTCC ATTTCCCACA CTATATCCAT      6540
     CAATCCCAGC CCAAGTATAG GCTTCTCTTT AAGGGAAGGG GAGTGACGTA TTTGGGTGGT      6600
     CCAAACCAGC CACTTCCATT ATTTCAAAGA AATCAGTAAT GCACTCTAGT AATTTTCCAT      6660
     AACTGTATCC CAGCTGCGCA GACTCGTTTA TCTTTTGCAG CGCAGCGTTC TTTGTAAACA      6720
     TCCTAAAGAC CTGCCTAAGC AGATTTGACT GCCCTCTTTC AACGCTACCT AATCTTAAGA      6780
     ACCCAAGAGC GAGGCTCTCC CGAAATACAA ATATTGTTCA AATACTGAGG CTTCTCCTCA      6840
     ATCCAATTTG CATTTGATTT TTAGTCTTAA GCTGAGATCC AAAGAATAAA GTCGTGAAAC      6900
     TATTTCTCCT AAAAACTATT TTTTATTTCT TGGCGTTGTC CTTAGTCAAC TGACGGGACA      6960
     TTAGTTCGAC TCATAAATAA AACAACAATT TTACT                                 6995
//
ID   DM23420    standard; DNA; INV; 6126 BP.
XX
AC   U23420;
XX
DR   FLYBASE; FBgn0005384; 3S18.
XX
SY   synonym: BEL
XX
FT   source          U23420:1..6126
FT   SO_feature      five_prime_LTR ; SO:0000425:1..361
FT   SO_feature      three_prime_LTR ; SO:0000426:5766..6126
FT   SO_feature      CDS ; SO:0000316:919..5742
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0044337; 3S18\ORF"
FT                   /db_xref="REMTREMBL:AAB03640"
FT                   /protein_id="AAB03640.1"
FT                   /translation="MFIGSIASNSSLTDCQRFHYLKSYLAGDALALVKHIPVTNDNYRE
FT                   AWERLEQRYNKQSLIIRSFLNSFMSLPSAINSNIGTVRKIADGADEVIRGLRALNCEER
FT                   DPWLIFILLSKLDSDTRQAWAQCAESEEKGVTINRFLKFLTSRCDTLEAFELTRSTQAR
FT                   RAATTHHADTHPRREEPKCTSCQQNHQLFKCPQFIALDIASRRDFLKSRKLCFNCLSPA
FT                   HMVGNCTSRHTCRICRRKHHTLVHGSSQPIQNGNNIDTASVDSRDRPAVSHAGSTIGHN
FT                   QPLAREGHRLGSETPAENNFTHHTLENIPAAGSQTLLPTILADVIDAWGNTTTCRLLLD
FT                   TGSTITLASESFVQRIGVRRTHARISILGLAANSAGVTRGRAHIKLRSRHSGQTVELVS
FT                   FILTSLTSSLPAQVIDTSSSTWRQICELPLADPTFCTPGAIDVIVGSDQLWSLYTGDRK
FT                   HFGNDFPIALNTVFGWILAGSYSAFDDHPTSAVTHHADLDTMVRSFMEMDSIQPNQALL
FT                   DASDPTERHFAATHKRSTDGVYVVEYPFKEKAPPIDSTLPQAINRFFSLERKFRRYPEL
FT                   KQQYEAFLDDYLQRGHMEKLTSAQVEESPDTCFYLPHHAVIKLDSLTTKCRVVFDGSGK
FT                   DSSGVSLNDRLHIGPPIQRDLFGVCLRFRQHQYVLCADVEKMFRGIKVFKPHTNFQRIV
FT                   WRTTENEPLLHFRLLTVTYGLAPSPFLAVRVLKQLADDHGHEYPAAAHALLHDAYVDDI
FT                   PTGANTFEELMILKDELIALLDKGKFKLRKWSSNSWRLLKSLPEEDRCFEPIQLLNKSA
FT                   ADSPVKVLGIQWNPGKDVLYLNLKGCDATISPTKRELLSQLSRIYDPLGLVAPVTVLLK
FT                   LIFQESWTSVLQWDDPIPESLRTRWRALVEDLPALTQCQVPRYIASPFRDVQLHGFADA
FT                   SSHAYGAVVYARVAVGCSFQVTLVAAKTRVAPIKPVSIPRLELNAALLLSRLLSIVKTS
FT                   LTIPLFSTSCWTDSEIVLHWLSAPPRRWNTYVCNRTSEILSDFPRSCWNHVRTEDNPAD
FT                   CASRGLHPSKLLEHRLWWKGPSWLATPTSEWPPSTSKFSVSSSFDVNTEERAIKPTTLH
FT                   NFPDESIHELLIHKFSTWTRLIRVSSYCHRFIHTLRSHHRNSAPFLTSEELLDAQRRLI
FT                   RHVQQKSFAREYEQLENRRQLNAKSHLIRFSPFLDDYGVMRVGGRIEQSTLNYNAKHPI
FT                   LIPKDTPLAGLLVRHFHVSYLHTGVDATFTNLRQQYWILGARNLVRKAVFQCKSCFLQR
FT                   KGTSNQIMGELPIPRVQASRCFQHTGLDYAGPIAIKESKGRTPRIGKAWFSIFVCLTTK
FT                   ALHIEVVSELTTQAFIAAFQRFIARRAKPTDLYSDNGTTFHGGKKTLDDMRRLAIQQAK
FT                   DEELAGFFANEGISWHFIPPSAPHFGGMWEAGVRSIKLHMKRILGSKALTFEELSTVLT
FT                   QIEAILNSRPLCPTGDNSLDPLTPAHFLTGSPYTALPEPCRLDMQVNRLERWNQLQAMV
FT                   QGFWKRWHMEYLTSLHERTKWHLETENLKIDTLVVLKEPNLPPSKWILGRITAVHAGID
FT                   NKVRVVTVKTAHGLYKRPIAKIAVLPLC"
XX
CC   Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 6126 BP;  1623 A; 1556 C; 1346 G; 1601 T; 0 other;
     TGTTTGGGAA CGAGACACCC TGTATACGCG AACAAGTCAC CCTTTATCTT TATTTACATT        60
     CTTATTTGTC TGCAGCTTCA TCGGAGCTTA TCAGCGGAAT CAATGTAAGC ATCGCACCGC       120
     TGTAATTGTC CGCGAGCTTG CCCAGTACTT TTCCAAACTT CTAACTCCCT TCTAACTGTA       180
     ACTTGTTTAC GTCTTATGCT AGACTAATCG TATGGCGTGA TTACAGCCAA AGCTGAAGTC       240
     AGTCACAATT TTGATCTGCG AGAAAACGTA CGCATCGGTG TCGAAATAAT TAATATTAAG       300
     TGTCTGAACT TAACCAATAA ATGAAAATTA ACAGTAACAC TGGCGGTTTT ATTTATAAAC       360
     ATAAAAATTG GTCCTTCGAG CCGGATAACC GGAAGTGCGT TTCGTTCGGG CATTTGATTT       420
     TGATTATTGG CCTTTTGGCA AACGATAATC TATAGATTCC TACATCGTGT AGAATCGTTC       480
     CCTTCTTTCG ACCACCATGC GGAGTGTGAT TCAACAACGG GGCTTCTGCA AAAGCCAAAT       540
     TACTCGTGCG CATAATAATG CCTTAAAATT TGTTGATGAC ATTCACTCAG TGCAAACAAT       600
     AGTTGTCCGC CTGGCGCAAC TACAGGAAAA TTATTTGCGG TTCGTACGGC TCTCGGAAGA       660
     GCTGTATGCA TTTCAATCGG AAGCCGATTG GGAGAACCCT GACGAGGATT TTGACGCATA       720
     TGAGGACAAA CATTATGCTA CACACGCTAT TCTCAGCAAT ACTTTGGAGG AGTTGAGACG       780
     GGATGTCACC TCAAACAGTA TTGATGCCAC AGTTCAAGCG CAGGCACACC CCAGAGAAGT       840
     CATGTCGATT TTCAGTTCGA GAGAATTAAA CTTCCGACTT TTTCTGGAAA TTATGAGGAC       900
     TGGAAACATT TTTCGGACAT GTTTATTGGA TCGATTGCTT CCAATTCGAG CCTGACGGAT       960
     TGCCAACGAT TTCATTATTT AAAATCGTAC CTTGCCGGAG ACGCGCTTGC ATTAGTTAAA      1020
     CATATTCCAG TTACTAATGA CAACTATCGG GAAGCATGGG AGCGGCTGGA ACAGCGATAT      1080
     AACAAACAAT CGCTAATTAT TCGATCGTTC TTAAACAGTT TCATGAGCCT TCCGAGTGCT      1140
     ATAAATTCAA ATATCGGCAC AGTGCGGAAA ATTGCCGATG GTGCAGACGA AGTTATTCGT      1200
     GGTCTACGAG CTCTTAATTG CGAAGAGAGG GATCCCTGGC TAATTTTCAT TCTACTTTCA      1260
     AAATTAGATA GCGATACCCG CCAAGCCTGG GCTCAGTGCG CAGAATCCGA GGAAAAAGGT      1320
     GTGACCATCA ACCGATTCTT GAAATTTCTC ACATCACGCT GCGATACGTT GGAGGCTTTT      1380
     GAATTAACTC GATCAACCCA AGCTCGACGC GCAGCTACCA CGCACCACGC AGACACGCAT      1440
     CCAAGACGGG AAGAGCCGAA GTGCACATCG TGCCAGCAGA ATCACCAACT GTTTAAGTGT      1500
     CCTCAATTCA TCGCACTCGA CATTGCATCT CGCCGAGACT TCCTCAAATC AAGAAAGCTC      1560
     TGTTTCAATT GCCTCAGCCC GGCTCATATG GTGGGCAACT GTACATCGAG GCATACTTGT      1620
     CGGATCTGCC GCCGCAAGCA TCATACTTTG GTTCATGGCT CGTCGCAGCC AATTCAAAAT      1680
     GGCAACAACA TTGACACAGC AAGTGTTGAC AGCCGCGATC GACCAGCAGT CTCACATGCG      1740
     GGATCTACAA TTGGCCACAA TCAACCGCTA GCTCGAGAAG GTCATCGCTT GGGAAGCGAG      1800
     ACTCCCGCGG AAAACAACTT TACGCATCAT ACTCTGGAGA ATATTCCGGC GGCTGGTTCT      1860
     CAGACTCTGT TGCCAACCAT CCTTGCTGAC GTCATCGACG CCTGGGGAAA CACTACAACC      1920
     TGCAGGCTGC TCCTGGACAC TGGATCTACA ATAACCTTGG CATCGGAATC ATTTGTTCAG      1980
     CGAATAGGCG TGCGTCGAAC GCACGCACGG ATTTCTATTC TCGGTCTCGC CGCCAACAGC      2040
     GCGGGCGTTA CCCGAGGACG CGCACATATC AAGCTGCGCT CTCGTCATTC GGGCCAAACT      2100
     GTCGAATTGG TCTCGTTCAT TCTCACCTCG CTGACGTCAT CACTTCCTGC CCAAGTTATT      2160
     GACACCTCAT CCTCTACGTG GAGGCAAATC TGCGAGCTTC CTTTGGCAGA CCCAACGTTC      2220
     TGCACACCTG GAGCAATCGA TGTCATTGTT GGATCGGATC AACTTTGGTC TCTATACACA      2280
     GGAGATCGGA AACACTTTGG TAACGACTTT CCTATCGCTC TCAATACTGT ATTTGGTTGG      2340
     ATTCTTGCAG GCTCTTACTC TGCATTCGAT GATCACCCTA CTTCTGCGGT TACTCATCAC      2400
     GCGGACCTAG ACACGATGGT TCGTTCATTC ATGGAGATGG ACAGCATTCA GCCTAACCAG      2460
     GCTCTCCTGG ACGCCAGCGA TCCCACAGAG CGTCATTTTG CTGCCACACA CAAGCGCTCG      2520
     ACGGACGGGG TGTACGTCGT CGAGTATCCC TTCAAGGAAA AGGCACCGCC TATTGATTCG      2580
     ACCTTGCCAC AGGCCATCAA TCGCTTCTTC TCGCTGGAAC GCAAATTTCG TCGGTATCCA      2640
     GAATTGAAGC AGCAGTACGA AGCTTTCCTG GACGACTACT TGCAACGTGG ACATATGGAA      2700
     AAACTGACCT CGGCTCAGGT TGAAGAGTCC CCAGACACCT GCTTCTATTT GCCGCACCAC      2760
     GCTGTCATCA AACTGGACAG TCTGACTACC AAATGTCGTG TAGTTTTTGA TGGATCAGGA      2820
     AAAGACAGCT CTGGAGTATC GCTCAATGAC AGACTACATA TTGGTCCACC GATTCAACGC      2880
     GATCTTTTTG GCGTTTGTCT ACGCTTCCGG CAGCACCAAT ATGTTTTATG TGCAGATGTC      2940
     GAAAAGATGT TTCGAGGCAT TAAAGTCTTT AAGCCACACA CCAATTTTCA GCGCATTGTT      3000
     TGGCGCACGA CTGAGAATGA ACCTCTGCTT CATTTTCGCC TGCTGACGGT TACCTACGGA      3060
     TTGGCACCGT CACCATTTCT GGCTGTTCGA GTTCTAAAGC AACTTGCCGA CGATCATGGC      3120
     CATGAATACC CTGCAGCAGC TCACGCTCTT CTGCACGATG CCTATGTGGA CGATATCCCG      3180
     ACAGGCGCCA ACACATTCGA GGAGCTTATG ATTCTCAAGG ACGAGCTTAT AGCCCTCTTG      3240
     GATAAGGGAA AATTCAAGCT ACGCAAATGG AGTTCTAATA GTTGGCGTCT TCTGAAATCA      3300
     TTACCAGAGG AAGATAGATG TTTTGAACCT ATCCAGCTCC TCAACAAATC AGCTGCGGAT      3360
     TCACCTGTCA AAGTTCTTGG TATCCAATGG AACCCTGGGA AGGACGTCCT GTATCTCAAC      3420
     CTAAAGGGAT GCGATGCGAC CATTTCTCCG ACGAAAAGAG AACTCTTGTC TCAGCTATCA      3480
     AGAATTTATG ATCCGCTTGG ACTGGTAGCG CCGGTCACAG TTCTACTCAA GCTAATCTTC      3540
     CAAGAAAGCT GGACAAGTGT CCTGCAGTGG GACGACCCCA TACCTGAAAG TCTACGTACG      3600
     CGCTGGAGAG CCTTAGTAGA GGATTTGCCA GCACTTACGC AATGCCAAGT ACCACGGTAT      3660
     ATTGCGTCAC CATTTCGAGA TGTTCAACTA CACGGATTCG CCGACGCATC CTCGCACGCC      3720
     TACGGTGCGG TAGTTTACGC TCGAGTTGCA GTTGGATGCA GCTTTCAAGT AACTCTGGTT      3780
     GCCGCCAAAA CACGGGTGGC CCCGATCAAG CCCGTATCAA TTCCACGTTT GGAGCTAAAC      3840
     GCTGCGTTAC TTCTATCTCG ATTGCTTTCT ATTGTCAAAA CATCACTAAC AATTCCTCTT      3900
     TTCAGCACGA GCTGCTGGAC AGATTCAGAA ATTGTGCTAC ACTGGCTTTC AGCTCCCCCT      3960
     CGACGGTGGA ACACCTACGT CTGCAACCGA ACTTCTGAGA TATTGAGCGA CTTTCCCCGT      4020
     AGCTGCTGGA ACCATGTTCG CACGGAAGAC AATCCTGCAG ATTGTGCTTC CCGAGGACTT      4080
     CATCCGTCAA AGCTTCTGGA GCATCGACTG TGGTGGAAAG GTCCGTCTTG GCTGGCCACA      4140
     CCCACCTCTG AGTGGCCACC TTCTACAAGC AAGTTCAGCG TATCTTCAAG TTTCGATGTC      4200
     AACACCGAAG AACGAGCCAT AAAGCCCACG ACTCTACATA ACTTTCCTGA TGAAAGTATA      4260
     CACGAGTTAC TCATCCACAA ATTCTCAACC TGGACGCGTC TTATAAGGGT ATCTAGCTAC      4320
     TGTCATCGCT TTATTCACAC TCTTCGATCC CATCATAGGA ATTCGGCACC ATTCCTTACG      4380
     TCTGAAGAGT TGCTGGACGC ACAGCGCCGA CTTATTCGAC ATGTGCAACA AAAATCCTTT      4440
     GCCAGAGAAT ATGAGCAGCT AGAGAATCGA CGCCAGCTTA ACGCTAAATC GCATCTTATC      4500
     CGGTTTTCTC CGTTTCTGGA TGATTATGGA GTAATGCGAG TCGGTGGGAG AATCGAGCAA      4560
     TCTACACTCA ACTATAACGC CAAGCACCCG ATTCTGATAC CTAAAGATAC ACCACTAGCT      4620
     GGACTCCTGG TTCGACATTT TCATGTCTCC TATCTGCACA CTGGAGTTGA TGCAACGTTC      4680
     ACCAATCTTC GTCAGCAGTA CTGGATTCTG GGAGCCCGCA ATCTCGTCAG AAAGGCAGTC      4740
     TTCCAATGCA AATCCTGTTT TCTTCAACGA AAGGGCACAA GCAACCAGAT CATGGGAGAG      4800
     CTACCAATTC CTCGAGTTCA AGCTAGCCGC TGCTTTCAAC ACACAGGGCT GGACTACGCT      4860
     GGACCGATCG CAATCAAGGA ATCAAAGGGA AGAACTCCAC GCATCGGAAA GGCATGGTTT      4920
     TCTATTTTCG TGTGTCTCAC TACAAAGGCA CTTCACATCG AGGTTGTTAG TGAGCTAACT      4980
     ACACAGGCTT TCATCGCAGC CTTTCAACGA TTCATTGCCC GCCGAGCGAA GCCTACTGAC      5040
     CTGTATTCGG ATAATGGAAC AACATTTCAT GGAGGCAAGA AAACTTTGGA TGACATGAGA      5100
     CGTCTGGCCA TTCAACAAGC CAAAGATGAG GAACTAGCAG GATTCTTTGC CAATGAAGGG      5160
     ATTTCTTGGC ACTTTATACC CCCGTCTGCT CCACATTTTG GAGGGATGTG GGAAGCTGGA      5220
     GTTCGCTCAA TTAAACTCCA TATGAAACGA ATACTTGGAT CAAAGGCTTT AACGTTTGAG      5280
     GAGCTCTCTA CTGTCCTGAC CCAAATTGAA GCTATCCTGA ATTCACGCCC GCTGTGCCCA      5340
     ACTGGGGATA ATTCTTTGGA TCCACTGACG CCTGCTCATT TTTTGACTGG ATCTCCGTAT      5400
     ACTGCATTGC CTGAACCCTG TCGTCTGGAT ATGCAAGTCA ATCGATTGGA GAGGTGGAAT      5460
     CAGCTGCAAG CCATGGTTCA AGGCTTTTGG AAAAGGTGGC ATATGGAATA CCTGACATCT      5520
     CTTCATGAGC GGACAAAGTG GCATCTGGAA ACCGAGAATC TGAAGATCGA CACACTGGTA      5580
     GTACTCAAGG AGCCCAATCT ACCGCCCTCT AAATGGATTC TTGGCCGCAT CACAGCAGTG      5640
     CACGCAGGAA TCGACAACAA GGTCCGAGTC GTTACAGTGA AGACTGCTCA CGGATTATAC      5700
     AAACGCCCAA TTGCCAAAAT CGCTGTACTG CCTCTCTGCT GAACAACCGT TCAGGGGGGC      5760
     CGGTATGTTT GGGAACGAGA CACCCTGTAT ACGCGAACAA GTCACCCTTT ATCTTTATTT      5820
     ACATTCTTAT TTGTCTGCAG CTTCATCGGA GCTTATCAGC GGAATCAATG TAAGCATCGC      5880
     ACCGCTGTAA TTGTCCGCGA GCTTGCCCAG TACTTTTCCA AACTTCTAAC TCCCTTCTAA      5940
     CTGTAACTTG TTTACGTCTT ATGCTAGACT AATCGTATGG CGTGATTACA GCCAAAGCTG      6000
     AAGTCAGTCA CAATTTTGAT CTGCGAGAAA ACGTACGCAT CGGTGTCGAA ATAATTAATA      6060
     TTAAGTGTCT GAACTTAACC AATAAATGAA AATTAACAGT AACACTGGCG GTTTTATTTA      6120
     TAAACA                                                                 6126
//
ID   412      standard; DNA; INV; 7567 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0000006; 412.
XX
SY   synonym: mdg2
XX
FT   source          nnnnnnnn:1..7567
FT   SO_feature      five_prime_LTR ; SO:0000425:1..514
FT   SO_feature      three_prime_LTR ; SO:0000426:7054..7567
FT   SO_feature      CDS ; SO:0000316:679..1044
FT   SO_feature      CDS ; SO:0000316:1408..1722
FT   SO_feature      CDS ; SO:0000316:1888..3243
FT   SO_feature      CDS ; SO:0000316:3864..6866
XX
CC   Berkeley Drosophila Genome Project.
XX
SQ   Sequence 7567 BP; 2982 A; 1367 C; 1323 G; 1895 T; 0 other;
     TGTAGTATGT GCCTATGCAA TATTAAGAAC AATTAAATAA AATAGCATAT TAACTTATGG        60
     CAGCACTTTG TTGCTATGTT TATGTTTATG TTTATGCACG CAGTTAGGCC AGGGCGGATG       120
     TAACATGATC ACCCACTCGA AGGCCACAAA GTATAAGTGC ATTGCCCAAT CGAAGGCAAA       180
     AAGTATAAGT GCATGGTCAG CATTCACACG CCGACCAAAT ACATATTACA TACGTACATA       240
     CATATCTCGC TCTCCCGATA AGCCTAGATA TATAAGATAT ACATAAGAAC GCCGCTCCGC       300
     TGCTGGCGTA CCCGGCAGCG CAGCTACGCG GATTAGCCTA AGTCCAAATA TATAAAAAAC       360
     TGTAAAATCG GAGAGACTCT GTAGACGTTG AGCTGACAGA ACCATTTCTG CCTACTCTAA       420
     AATCAAAAGA AGAAATTGAA TAAATATATG TCAGCCCGAC GGCTGCCTTA AACTTAAAAC       480
     GGACTTGTGT TCTTAATTGG AGTTCATCAT TACATGGCGA CCGTGACAGT CGTCCAACGC       540
     TGGACGAATT GACCAAAGCT GGTGAAAACA AAGGAACAAA GGAACACTGG ACTGGAAGAA       600
     GACTGGACTA ATTAAATGGA ACTGCAAAAA CCAAGGAAAA ATCTGAGTGA GTAGAGTTCT       660
     ATTGAGTATG GGCAAACACC GTGGCGGTTT GAAAACTAAG CTGAATAAAC GTATAGCCCA       720
     CGTAAGGTGG CTAATATACG GTCAGCAAAC GCCACCGGTT TGGTCGAAAG CTCTAAAGCT       780
     ACATGCAGAG CTAGACCACT TGTTGCAATA TCAGCAAGAA TTAAAGACCC ATAAGCTCGA       840
     GAAAACTCAC TCAGATAATA TTAAAAATAT ACCCACAATT AATGAAGTTC CAAAATACCA       900
     GGCATGTCCA GCACCAGCAC CAGCATTAAC AAAACCAAAG AAGTCCTGCC CCCCTGGCTG       960
     CGAAGGAATC TGGAGTCCCC ACTGCCTGGG GACTTGTGAG CGACCATCGA CGTCTTCAGC      1020
     GGCGAAGAAA TAGACAGCAG CGAGGGAGTG TCAGCGTGCC ACCCCCGGCG ACGCCCAGCT      1080
     GACACCCAAC AAATAGACAG CAGCGAGGGA GTGTCAGCGT GCCACCCCCG GCGACGCCCA      1140
     GCTGACACCT GATGAGCATC ATCAACAGCA GAATATAATA ATAAATATAT ATAAATATAA      1200
     AGTAAATATA AAATATATAT AGATAAGAAA AATTGTAAGA AATATTGTAA AACGGAGCAT      1260
     ATACTATTAT GCCCTGTTAA CCCAATATGG CCCGTGAAGC CATAGCTAGA ATCAGGCAGG      1320
     CAACAATGTA AAATACAATT TTTTTTTACT CTTGCGAACA TTGAAAGATT TTATAAATAG      1380
     ATAATTCCAA ACATAAATGT CTATAGAGAC AAATGAAATA AGTAAAACTG AAAATAAAAG      1440
     TATATACAAA GGAAATTTTC TATTCTATTC TCCAAAATAT AAAATTAGTA TACCCAAAAT      1500
     GGGTCTAATA GACACTAAAA CTGTGGACTC TACAGCCAAT GTAATAAATA AAGTAGAAGT      1560
     CCAAAATGCA GACTTGTTCT GGATAACCAT AATACTAATT GTAATTGCAT TAATTATGGT      1620
     ATCCAATGCA TTAATAAAAA TATACAAACT GCATAACAAG TGTCTTAAGA AACGATACCG      1680
     TAGCACTGCT AACGGTATAG ATAATATTTA AGGAAGATCT TTAATAAAGT CAATTATGAA      1740
     TGAAAATATG AGAAAAATTA TATGAAAAAA AAAAATAATA AATAAAAAAA AAATATAAAA      1800
     CGTAATATTG AATTTATCTA CATTAAAAAA AAATATATAC AAATGAATAA ATTTGAAGTT      1860
     ATGAGTATAC CACAGCATGG ACTGGGAAAA GCTTGTTGAT CAGATAAAAG ATCAAAATGA      1920
     AAATTTCAGA AAATCCTATA AGTGCTTAAC GCAAAACAGA TCAACACAAG CTGTAACAAT      1980
     CAATAGGAAT GCCCAAGTCT TGGTAAATAG TTATAATGAA ATCAGAGAGT TGATCCAACA      2040
     AAATAGAAAG AATTTGGAAC GCAAACAGTG TGCTAAGGCT TTGAACCTAC TGGTGACATT      2100
     AAGAGAAAAA TTAATATTTA TAAAAAATAA ATTCAGTCTC CAGATAGAAA TTCCAACCAT      2160
     AGTAAACACC CCACTAAGAA TAAATTTGAA TGAAGACAGC ACTAACTCTG ACGAGGAAGA      2220
     TAGGACTATA GTCAAGGAAG ACATTAAAGA GGAAGATCTT CACGATCTAA CTATACCAGC      2280
     AAAATTAATG CTGAAGAACG ACGATAAAAC AAATAACGCA GCCGACTCCG AAAATAACTT      2340
     AACCATGGCA GAAGAAGCAG CTGCCATTAG GTCTTACATT AGGGAAGTCG CCTGCACAGT      2400
     GCCAGAATTT GATGGGCAAA AGATCCATTT ACAAAGATTC ATTAAGGCAA TCAAATTGGT      2460
     AGACCTAGCT AAGGGACCAT TTGAAGACAT TGCAGTTGAG GTCATTAAGT CAAAAATAGT      2520
     TGGCACAATT TTGAACTCAG TTGACAATGA AACGACAATT CCAGCAATTA TAAACAAATT      2580
     GCAGAAAGTA GTTGTCGGTG AGACATCCAG TAATGTCAAA GCAAAGCTAG CAACAGTTCA      2640
     GCAGAGAGGT AAAACTGCAA CGCAATTTAC CGCTGAAGTT GATAGCCTGA GAAAACTTTT      2700
     AGAAGCTTCC TATATCGATG AGGGTATACC TCTAGAACAT GCCACTGGTC TAAGCACCAA      2760
     AGAGGCAATT GAAACCATGA TACATCGTGC TGAGCACGAA AGTATCAAAA CAGTACTGGA      2820
     AGCAGGGACT TGCACCACTA TGGATGCAGC GATAAGCGCA TACATAAGAA CGAGTACAAG      2880
     AGTTACCGGT GACATCAATA AAGTGATGTA CTTTAGAGGT AACAGACCCA ATAGAGGATA      2940
     CGGAAATGCC AATAGAGGTA GTAACCGCGG TAGAGGCTTT AATAACAATA GTATTAGAGG      3000
     CAACTACCAT AACGGTTACC AAAATAACGG TTACCAAAAT AACGGTTACC AGAATAACGG      3060
     TTATCAAAAC CGCTATAATG GAAATAATAA CCGTTATAAT GGCTATAACA GAGGCCGTTA      3120
     TAATGGAAAC AGAGGCCGTA ACAACAGTCA GAACAACTAC AACAGAAACA ATGCCAATGT      3180
     ACGAGTAATC CAAGAACAGG GAAACTCGCA ACAGCCTTTA GGTACTCAGT AGAAGAAGAT      3240
     CGTAGAGTAT ACACCATCAA TTATAATCTC AACATATTTT CTACATTCAT TCATGCCAAA      3300
     ACAGGCGTAA AACTAGTTTT TCTACTTGAT ACAGGTGCAG ATATCTCTAT TCTCAAAGAG      3360
     AACTCTGACA AATTTTCTAA TATTCAAATA ACCAATAAAA TAAACATTCA AGGCATAGGC      3420
     CAACAGAAAA TTCAGTCTCG AGGACAGACT TTTATTGAGA TACAGACAGG TAAATACGTT      3480
     ATCCCACACG ATTTTCATTT AGTAGATAAA AACTTTCCAA TACCGTGTGA TGGAATAATC      3540
     GGAATAGATT TCATAAAAAA ATATAATTGC CAAATCGATT TAAACCAAGA AGAAGATTGG      3600
     TTTATAATTA GACCAAACAA TTTGAAATTT CCAATATATA TTCCCATAGC ATACAGCTCT      3660
     GGTATTAACA CAACGTTATT ACCAGCAAGA TCCCAAGTTG TCCGAAGATT AATAGTATCA      3720
     TCAAAAGATG ATAACATTTT AATTCCAAAC CAGGAAATTC AAACTGGTAT TTATGTTGCA      3780
     AATACAATCG CAACATCAAG TAATACATTT GTCCGAATTT TAAATACAAC CGATTCCGAC      3840
     CAATTAGTCA ATATGGACAC TCTAAAATAT GAGCCACTTT CGAACTACAA TGTAGTTCAG      3900
     GCAAATAGTG AACACAGAAA TAAAACTGTC TTATCTCAAT TAAAGAAAAA TTTCCCCGAA      3960
     TTGTTTAAAT CACAATTAGA AAATATATGC AGCGAATATA TAGATATATT TGCATTAGAA      4020
     TCAGAACCTA TAACAGTTAA TAATTTGTAT AAACAACAGT TGAGATTAAA AGATGATGAG      4080
     CCAGTATACA CGAAAAATTA TAGAAGTCCT CATAGTCAAG TGGAAGAAAT ACAAGCCCAA      4140
     GTTCAGAAAT TAATAAAAGA TAAAATAGTT GAACCATCAG TTTCACAGTA CAATAGCCCT      4200
     TTGCTATTAG TACCCAAAAA GTCAAGCCCG AATTCTGATA AAAAGAAATG GAGATTAGTA      4260
     ATAGACTATC GCCAAATTAA TAAGAAACTT TTAGCTGACA AATTTCCACT ACCGAGAATA      4320
     GATGATATTT TGGACCAACT TGGTCGAGCA AAATATTTCT CCTGCCTTGA TTTAATGTCA      4380
     GGTTTTCATC AAATCGAACT GGATGAAGGC TCGAGAGATA TAACATCTTT CTCAACCAGC      4440
     AATGGCTCAT ATCGTTTCAC GCGATTGCCA TTTGGCTTAA AAATAGCGCC TAATTCATTC      4500
     CAAAGAATGA TGACTATAGC ATTCTCCGGA ATAGAACCGT CTCAAGCATT CCTTTATATG      4560
     GATGACTTAA TAGTCATAGG TTGTTCCGAA AAACATATGC TTAAAAACCT CACTGAAGTT      4620
     TTTGGTAAAT GCAGGGAATA CAACCTAAAG TTACATCCTG AAAAATGTTC ATTTTTCATG      4680
     CATGAAGTCA CATTTTTGGG ACACAAATGC ACAGACAAAG GAATTTTGCC GGATGACAAA      4740
     AAATATGATG TCATTCAGAA CTACCCAGTT CCACATGATG CGGACAGCGC TAGACGTTTT      4800
     GTAGCATTTT GCAATTACTA CAGACGTTTT ATCAAAAATT TCGCCGACTA TTCGCGGCAC      4860
     ATAACAAGAT TATGTAAAAA GAATGTTCCA TTCGAGTGGA CAGATGAATG TCAAAAAGCA      4920
     TTCATACATT TAAAATCTCA GCTAATTAAC CCAACACTCT TGCAGTACCC AGACTTCAGC      4980
     AAAGAATTTT GCATAACAAC AGATGCAAGC AAGCAAGCGT GTGGCGCAGT TTTAACTCAA      5040
     AACCATAATG GCCACCAACT CCCAGTTGCT TATGCATCCA GAGCTTTTAC GAAAGGTGAA      5100
     AGCAATAAGA GTACAACAGA ACAAGAGTTA GCAGCAATTC ATTGGGCAAT AATACATTTC      5160
     AGACCATACA TTTACGGAAA ACATTTCACT GTGAAAACAG ACCATAGACC ATTGACATAT      5220
     TTATTCTCGA TGGTGAACCC CAGCTCTAAA TTAACTAGAA TAAGGCTTGA ACTAGAGGAA      5280
     TATAATTTTA CAGTAGAGTA TCTAAAGGGC AAGGACAATC ATGTAGCAGA TGCGTTATCA      5340
     AGAATAACCA TCAAAGAGCT AAAAGATATA ACTGGAAATA TATTAAAAGT CACTACAAGA      5400
     TTTCAAAGTA GACAAAAATC CTGCGCAGGA AAAGAACAAT TGGATTTGCA AAAGCAAACC      5460
     AAAGAAATAG CTTCAGAGCC CAACGTATAC GAAGTCATAA CAAATGACGA GGTACGAAAA      5520
     GTAGTGACAT TGCAATTGAA TGACTCGATA TGTTTATTTA AACATGGAAA GAAAATTATT      5580
     GCAAGATATG ATGTTGGTGA TCTTTATACT AATGGAATTC TTGATTTAGA TCAATTTCTC      5640
     CAAAGGCTTG AATTGCAGGC CGGTATATAT GATATCAGCC AAATCAAAAT GGCACCGTGG      5700
     AAAAAAATCT TTGAACACGT TTCAATAGAT AAATTTAAAA ATATGGGCAA TAAAATATTA      5760
     AAGAATTTAA AAGTAGCGCT ACTTAACCCG GTGACCCAAA TAAATAATGA AAAAGAAAAA      5820
     GAAGCTATAT TGTCTACATT ACATGATGAT CCAATACAAG GAGGGCATAC AGGCATTACA      5880
     AAAACCTTGG CCAAGGTCAA AAGACATTAT TACTGGAAAA ATATGAGTAA ATACATAAAA      5940
     GAGTACGTAA GAAAATGTCA AAAATGCCAA AAAGCAAAAA CAACAAAGCA CACAAAGACT      6000
     CCAATGACGA TAACTGAAAC ACCAGAACAT GCTTTCGATA GAGTTGTTGT GGACACAATT      6060
     GGTCCACTAC CCAAGTCAGA AAATGGTAAC GAGTACGCAG TCACTCTCAT ATGTGATTTA      6120
     ACCAAGTACT TAGTTGCCAT ACCAATAGCA AATAAAAGCG CAAAAACAGT CGCAAAAGCT      6180
     ATATTTGAAT CTTTTATTCT AAAGTACGGT CCAATGAAGA CGTTCATAAC GGACATGGGA      6240
     ACAGAGTATA AGAATTCAAT AATTACTGAC CTGTGTAAAT ATTTGAAAAT AAAAAATATA      6300
     ACATCAACAG CTCATCACCA CCAGACAGTT GGAGTAGTAG AAAGAAGTCA TAGAACCTTA      6360
     AACGAGTATA TACGATCCTA CATATCGACG GACAAAACCG ATTGGGACGT ATGGCTTCAA      6420
     TATTTCGTAT ACTGCTTCAA CACGACCCAA TCTATGGTAC ATAATTATTG TCCATATGAA      6480
     TTAGTTTTCG GTAGAACAAG TAATTTACCA AAACATTTTA ATAAACTACA TAGCATAGAA      6540
     CCAATATATA ACATAGATGA TTACGCTAAG GAGAGTAAAT ATAGGTTAGA GGTAGCATAT      6600
     GCTCGAGCAA GAAAACTTCT CGAAGCACAC AAAGAAAAAA ATAAAGAAAA TTATGACTTA      6660
     AAAATAAAAG ACATAGAATT AGAAGTAGGA GATAAAGTTT TACTAAGAAA TGAGGTAGGT      6720
     CATAAATTAG ACTTTAAATA TACGGGGCCC TATAAGATAG AAAGCATAGG AGATAATAAC      6780
     AATATTACGC TACTTACTAA TAAAAACAAA AAACAAATAG TTCATAAAGA TAGATTAAAG      6840
     AAATTTCATT CATGATTGAA TTTAAACTTA TATTTTCCTT AATCATTTAC ACAAATTTTC      6900
     CATACACTAC GTATATTTTT ATCTTTGCAT TATAAAATCA ACTATTGTTG TTCAAACAAA      6960
     AACACAAACA AAATAAAAAT AAAAATAAAA TAATTTGCAT TTAATAATCA AAATAACTTC      7020
     ACTAGGTTAC GTTATTTTTC AAAAGGAGGG AGATGTAGTA TGTGCCTATG CAATATTAAG      7080
     AACAATTAAA TAAAATAGCA TATTAACTTA TGGCAGCACT TTGTTGCTAT GTTTATGTTT      7140
     ATGTTTATGC ACGCAGTTAG GCCAGGGCGG ATGTAACATG ATCACCCACT CGAAGGCCAC      7200
     AAAGTATAAG TGCATTGCCC AATCGAAGGC AAAAAGTATA AGTGCATGGT CAGCATTCAC      7260
     ACGCCGACCA AATACATATT ACATACGTAC ATACATATCT CGCTCTCCCG ATAAGCCTAG      7320
     ATATATAAGA TATACATAAG AACGCCGCTC CGCTGCTGGC GTACCCGGCA GCGCAGCTAC      7380
     GCGGATTAGC CTAAGTCCAA ATATATAAAA AACTGTAAAA TCGGAGAGAC TCTGTAGACG      7440
     TTGAGCTGAC AGAACCATTT CTGCCTACTC TAAAATCAAA AGAAGAAATT GAATAAATAT      7500
     ATGTCAGCCC GACGGCTGCC TTAAACTTAA AACGGACTTG TGTTCTTAAT TGGAGTTCAT      7560
     CATTACA                                                                7567
//
ID   DMAURA     standard; DNA; INV; 4263 BP.
XX
AC   AB022762;
XX
DR   FLYBASE; FBgn0010103; aurora-element.
XX
FT   source          AB022762:1..4263
FT   SO_feature      five_prime_LTR ; SO:0000425:<1..112
FT   SO_feature      three_prime_LTR ; SO:0000426:4046..>4263
FT   SO_feature      primer_binding_site ; SO:0005850:119..134
FT   SO_feature      primer_binding_site ; SO:0005850:4035..4044
XX
CC   Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1).
CC   Takis Benos and Michael Ashburner, 27-March-1999.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 4263 BP; 1021 A; 1018 C; 1375 G; 849 T; 0 other;
     GAATTCTTCA AGAATAAAAC GTGTTCTACT ACCACGGATT AGTCTGCCCT TTCTTTCGGG        60
     AACCAATGTG TGGGGTAGCC GTTTAAGGCA ACTCCCTGGA CGCACGACGA CAACCTTTTA       120
     TTCGCAGTCC TAGGGCGACT GCAGGGGCAA CTTGCGCTGG AATGACGGTT TAGACGGCCA       180
     GCTAGAGAGT TGCCGGAGCT GGAGTGACGG TTTAGACGGC CAGCGAGGAG GATTTGTGTG       240
     AGCGCAGCCA GCGCTACGTA CCGGCAGAGG AGTCGCAGTC AGCGACATAG AGGGACGCAG       300
     CCAGCGTCGA ACGCCGGTAC GAAAGGGTCG CAGCCAGCGA CAAGGAGACG CAAGAAGCGT       360
     CATTTGTGGA GACCGCAGCC AAGCATCCGT GGCCGCAGCC AGCGGCACGA GGCGTCAGAG       420
     ACGCCATTTC GGACGCGCAG AGGCGCCGCC ATTTTTGGAG CTGGGAAAGA TGCAGCATTC       480
     CCCCAGGAAG AGTGCCCGGC TGAACGGAGG GGAAGTCACC CCTATAACAA CAGTGAGTCA       540
     GCAGCCAGCC AGTAGTGGAG CAGGAACTCG GACGCGGGTG AACATCACGG CGGCGTCGAT       600
     TCCTTGCCCG GCCACTACGG TGACTACAGT AGCTTCCCAA CCTAGAAGTA CTGCTGTCAC       660
     AGCTGCGAGT TCAGTACCGG AGGTGAACCA GCCCCTCGTG TTGGAACTCA TGGAGAGGAT       720
     CGCAGCGTTG GAGAGGGAGC TGGAGAAGAC TAGATCCCTA GAAAGTGTGA GCACCGCCAA       780
     TTGCGCGCCA ATCGCAGTTG GCCCAAGCGC AGTTGGCGCC AACAGTGGAG CGTCGGGGCG       840
     GCCGCCATTT TGGAGCGGCC AGCTAATACC CACATCTAAC GGAGAGGCCT TACATAACGG       900
     GGACTGGGCC AGGCATGCTG CAACGATTGC GCCCTTTCCC ACTGTAGTCC ACTTCAGCGC       960
     GTGGCTACAG GAGTACGCAA ACGTGGTGTG CACGGTTTTG GACGTCGAGG GAAAGGAGCC      1020
     GAGGCGTCGA CTTCTACATG CAAGCGTCGA CCATAATGAA TGCGATCAAC AGGATGATCG      1080
     GCATGGAGGT TGTCCCATCT GTGGAGGACA GCATGAAATA TTGAACTGCA GAAAATTTAT      1140
     TGGAGCTTCG CCACAGGAAA GGTGGAGCAA TGTGAAGAGG CATCGGCTCT GCTTCAATTG      1200
     CCTGCGAAGC GGGCACACGG CTAGATCCTG CTATACGCAA GGTGAGTGCC AGGTTAATGG      1260
     ATGCCGAAGG GAGCATCACC GTCTGCTACA TGGTGCGGAC GGAGGAACGA AGGCCGCTGC      1320
     AGCGAGGTGG CTTCAGACGC CACGAAGGGA ACCAGCAGCC AGCAGTTTCC AGACGCAGCC      1380
     TAAAGGGGAG GCCTTCGCTA CGAGATGGTC ACAGGGACCA GGAGAGGAAC CGGCAGCCAG      1440
     CCGTTCCAAG CAACAGTCTG GAGAGAGGAG CTCCACGTGA AGCGGGAGCG CCCATGCAGA      1500
     GGAATTTGAG CTGCGTTGAC GCCGAAGGAG GCCGTCTACT GTTCCGTATA CTGCCGGTTA      1560
     CGCTGTACGG AGCGGGGCGA AAGGTGGATA CATATGCGCT CCTAGATGAG GGATCCTCCG      1620
     TCACGATGAT CGATGACGAA CTACGAAGGG ATCTTGGAGT GCAAGGAGAG CGTCGGCAGC      1680
     TAAATATCCA ATGGTTTGGT GGTAAGGCAA CCAGAGAGCC TACCAACGTG GTGAGTCCGA      1740
     AGATAAGTGG AGTTGGAAAG CCCACTCGCC ATGTATTGAG AAACGTTTAT GCCGTTTCGA      1800
     GCTTGAGTTT GCCGATGCAG ACATTGAGCC GACGAGATGT CCAGGGCGTG CACAGGGATG      1860
     CGCGTCTGCC CGATGAAGCC TTACAGCAAC GTGGTGCCGA AGCTGCTCAT CGGTCTGGAT      1920
     CACGGACATC TGGGGTTGCC ACTTAGGACG AGGCGGTTCG CTCGAGAGGG ACCGTATGCG      1980
     GCCGCAACCG AGCTGGGCTG GGTTGTGTTT GGGCCTGTAA GTGGGCAACC GACCACGCCG      2040
     TCACCGAGGT CCTGCCTACT TGCCGTGTCA GTGGATGACG CGATGGAGAA GATGGTGGAG      2100
     GACTATTTCG ACATGGAGAA CTTTGGAGTG AAGACCGCGC CGCCGGTCGC AGCCAGCGAC      2160
     GATGTCCGGG CCCAAAGGAT ACTCGAAGAC ACCACGGTGA AAGTGGGGCG TCGCTACCAG      2220
     ACGGGATTAC TCTGGAAGGA CGACCACGTT GTGCTGCCAC CGAGATATGA GGACGACGAC      2280
     GTGCAAGTGA GCTTCGTGAG TGCGAGGACG AAGTGTGCCC CAATGAGAAC GATGACGATC      2340
     CCACGGCTGG AGCTGCAAGC AGCAGTTCTT GGAACCAGGC TGATGAACAC TGTCAAGGAG      2400
     GAGCACAGTG TGGTCATCAC GGACCTGGTG TTATGGACGG ACTCTAAGAC GGTGCTGAGA      2460
     TGGATCGGCA GCACCCACCG CCGCTGACAA TGCGGCTGAT GATGCGACGC GGTCGCAGAA      2520
     AAGGAGTCGA CCTTAGCCAG GAATCAAGGT GGCTAAGAGG ACCTGCATTT TTGATGCAGC      2580
     CAGCAGCCAG CTGGCCGGGG TCTGAGGAAG GAACTGAGCG TGTTCCAGAT GTCCCTGATG      2640
     AAGAAGAGAT GCCCAGTGAG TTTGCATTAG TTGCGGTAGA CGATTTTGTC ATTCCGTTTC      2700
     AGAGATTCTC GAGCTTCAGT CGCCTGGTGA GGACCACAGC CTGGGTCCTA CGGTTTGCGC      2760
     GCTGGTGCCG CAAACAGCGA AACGATCTCG AGGAATACGG CCTTACCGCA GCCAGAATGT      2820
     AAGGCCGCCG GAACCGCACT GTGCATCCCG TACAGTGCGA GGAGGGCCGT ATTACTGTCA      2880
     CACAGGCACA GTCTGACGGA GCTGATTGTG AGAGACTTCC ACGCCAGGAT GAAGCATCAA      2940
     AATGTGGATG CTACGATCGC GGAGATCCGG ACAATGTTCT GGGTCACAAA GATGAGGCGT      3000
     GTGATGCGGA GAGTCATCTC ATCGTGCAAC GAGTGCAAGT TGCAGCGAGC GCGGCCGATG      3060
     CCGCCGATAA TGGGACCCCA TCCGGAAGAC AAACTGGATG CGGGTGGATG GCCATTCAAA      3120
     TACACAGGAC TGGACTACTT TGGGCCACTG CTGGTGACTG TGTCCCGTCA CAAGGAGAAG      3180
     CTTGGGTCGC CTTGTTTACG TGTTTGACGA CAAGGGCGAT TCACCTGGAG CTGGCGCATG      3240
     ACCTGTCGAC GGATTCCTGC ATAATTGCGA TCAGGAACTT CGTCTGCCGT AGAGGGCCAG      3300
     TATATAGACT GCGCAGCGAT AACGGCAAGA ACTTCGTGGG AGCTGACAGG GAAGCCAGGC      3360
     GCTTTGGCGA CGTATTCGAG ATGGAGAAGC TTCAGAGTGA GTTGACAAGC AGAAGCATTG      3420
     AATGGGTGTT TAATTGTCCA GCGAACCCGT CTGAGGGCGG AGTTTGGGAG CGCATGGTGC      3480
     AGTGCGTCAA GAGAGTACTG CGTCATACCC AGAAGGAAGT TGCGCCGAGG GACCATGTAT      3540
     TGGAGAGTTT CCTGATTGAG GCGGAGAATA TTGTAAACTC GCGTCCGCTC ACCCACTTGC      3600
     CTGTGGATGT GGACCAGGAG GCGCCGTTGA CGCCAAACGA TCTTCTCAAG GGAGTAGCCA      3660
     ATCTGCCGGA TACGCCTGGA TTGGATGCGG AGCTGCCCAA GGAAGGTACT ACGAGGAAGC      3720
     AGTGGAGAAT TTCTCGCCTG CTACGAGACC GTTTCTGGAG GAAGTGGGTC ATGGAGTACC      3780
     TGCCTACGCT TGTGCGCCGC GAGAAGTGGT GCCGACGAAC GGAGCCCATC CACCAGGGTG      3840
     ATGTGGTCTT CGTCTGCGAT CCTGCCTTGG CCCGACGAGA GTGCCGCAAG GGTATCGTGG      3900
     AGGAGATCTA CAGCGGAGCT GATGGAGTTG TCAGACGCGC TAAGGTGCGC GTGAACGAAA      3960
     ACGGCCTATC TAGGACAATG ATGCGACCCG TCTCTAAACT TGCAGTTATG GATTTGAGTG      4020
     AAGCGGTTCT TCACGGGGTC GGGGATGTCG CGGATCGAAT ATTGTTATCG ATAGGCTCTA      4080
     GTTAGTATTT TTGAGAAGTC CGAATGTGGA AGGATTTGTA AGCCCATATG TGTCTGGGCA      4140
     CGTTGTTTTT GGCCATTGTA AATTACCGGG AAAATTTAGC TTTTCATTGT CGTGTAAGAG      4200
     TTGGAGGACA CACTGCGGTG AGCTAATAAG TTAAGTTAGT TGCAATTGTG AAACATTGAA      4260
     TTC                                                                    4263
//
ID   DMBARI1    standard; DNA; INV; 1728 BP.
XX
AC   X67681; S55767;
XX
DR   FLYBASE; FBgn0005773; Bari1.
XX
FT   source          X67681:1..1728
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1..28
FT   SO_feature      terminal_inverted_repeat ; SO:0000481:1701..1728
FT   SO_feature      CDS ; SO:0000316:379..1398
FT                   /db_xref="FLYBASE:FBgn0043784; Bari1\ORF"
FT                   /db_xref="SPTREMBL:Q24258"
FT                   /protein_id="CAA47913.1"
FT                   /translation="MPKTKELTVEARAGIVARFKAGTPAAKIAEIYQISRRTVYYLIKK
FT                   FDTVGTLKNKKRSGRKPVLDQRQCRQILGVVAKNPSASPVKIALESKNTIGKQVSSSTI
FT                   RRRLKEADFKTYVVRKTIEITPTNKTKRLRFALEYVKKPLDFWFNILWTDESAFQYQGS
FT                   YSKHFMHLKNNQKHLAAQPTNRFGGGTVMFWGCLSYYGFGDLVPIEGTLNQNGYLLILN
FT                   NHAFTSGNRLFPTTEWILQQDNAPCHKGRIPTKFLNDLNLAVLPWPPQSPDLNIIENVW
FT                   AFIKNQRTIDKNRKREGAIIEIAEIWSKLTLEFAQTLVRSIPKRLQAVIDAKGGVTKY"
XX
CC   Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 1728 BP;  596 A; 291 C; 332 G; 509 T; 0 other;
     ACAGTCATGG TCAAAATTAT TTTCACAAAG TGCATTTTTG TGCATGGGTC ACAAACAGTT        60
     GCTTGTGCAG CAAGTGGGGG GAGGTGAAAT GCAAAAAAAC TTTTGCTTTT GCAAATTCAA       120
     ACCTATGCAG AGTCAGATGA AAGAAGAATT GAAAAAATAA CTGTTCCTAT GCGCAAGGAA       180
     GAGGCAAATG AAGAGATCTT TATCAGTTGT CAGAAGTATT TGCACACGGT TTCGTCGCAT       240
     CACAATTATT TTCACAACGC AATTTCTTCT TCAGTGATTG GTTTAGAGTG ACAAGTGCCG       300
     GTTTGTTTGC TTAAATACAT TTAAATTATT GAATAAAAAT TAGATTTAAT CATTTTCCTA       360
     TTACAGTTAT TAAATAAAAT GCCCAAAACA AAAGAGTTAA CAGTTGAGGC CCGGGCTGGT       420
     ATTGTTGCTA GGTTTAAAGC CGGTACACCT GCGGCCAAAA TAGCTGAAAT ATATCAAATT       480
     TCGCGTAGAA CTGTCTACTA CTTAATAAAA AAGTTTGATA CAGTTGGCAC ATTAAAAAAT       540
     AAAAAAAGAT CAGGCCGAAA ACCTGTGCTG GACCAAAGGC AATGCAGGCA AATACTTGGA       600
     GTTGTGGCGA AGAATCCTAG TGCCAGTCCG GTAAAAATTG CCTTAGAATC AAAAAATACA       660
     ATTGGCAAAC AAGTTAGTAG TTCTACAATT CGTCGCAGGC TAAAAGAAGC TGATTTTAAG       720
     ACATACGTTG TTCGCAAAAC GATTGAGATC ACACCAACCA ACAAAACAAA ACGTCTTCGA       780
     TTTGCGTTGG AATATGTTAA GAAGCCTCTT GACTTTTGGT TTAATATTTT ATGGACTGAT       840
     GAGTCTGCAT TTCAGTACCA GGGGTCATAC AGCAAGCATT TTATGCATTT GAAAAATAAT       900
     CAAAAGCATT TGGCAGCCCA GCCAACCAAT AGATTTGGTG GGGGCACAGT CATGTTTTGG       960
     GGATGTCTTT CCTATTATGG ATTCGGAGAC TTGGTACCGA TAGAAGGAAC TTTAAATCAG      1020
     AACGGATACC TTCTTATCTT AAACAACCAT GCTTTTACGT CTGGAAATAG ACTTTTTCCA      1080
     ACTACTGAAT GGATTCTTCA GCAGGACAAT GCTCCATGCC ATAAGGGTAG GATACCAACA      1140
     AAATTTTTAA ACGACCTTAA TCTGGCGGTT CTTCCGTGGC CCCCCCAAAG CCCAGACCTT      1200
     AATATCATTG AAAACGTTTG GGCTTTTATT AAAAACCAAC GAACTATTGA TAAAAATAGA      1260
     AAACGAGAGG GAGCCATCAT TGAAATAGCG GAGATTTGGT CCAAATTGAC ATTAGAATTT      1320
     GCACAAACTT TGGTAAGGTC AATACCAAAA AGACTTCAAG CAGTTATTGA TGCCAAAGGT      1380
     GGTGTTACAA AATATTAGTA TTGTATTTAT ATAAAATAAA GAAATTCTTA TGTTGAAATT      1440
     AGATGTTAAG CTGAAATTTA CTAAATTAAG TTGAGTGAAA ATACTTTTGA AGCGCAATAA      1500
     ACATGTGAAA ATACTATTGA CAACTTGCAT GCATATTTTC TTTTGCTTTA AGCTTTGTAC      1560
     TATGAACCGT TATCTTTCGT ATTTCTTTTC GACTACCTTC TGCATAGATC AAGCTAAGCG      1620
     ATAAGAACTA TTTCAGGCAA ATCGGACAAC AACAAGAAGA AATATAACAA AAAGAAGTTG      1680
     AAGTTTGCAA ATATTGTGCG TTGTGAAAAT ACTTTTGACC ACCTCTGT                   1728
//
ID   BS     standard; DNA; INV; 5142 BP.
XX
AC   nnnnnnnn;
XX
DR   FLYBASE; FBgn0000224; BS.
XX
FT   source          nnnnnnnn:1..5142
FT   SO_feature      CDS ; SO:0000316:341..2248
FT   SO_feature      CDS ; SO:0000316:2245..2965
XX
CC   Sequence identified by REPBASE:
CC   http://www.girinst.org/server/RepBase/RepBase6.6.embl/drorep.ref
CC   Assembled and annotated by Josh Kaminker & Michael Ashburner.
CC   REPBASE states this to be a consensus sequence.
CC   This replaces that from complement(X77571:651..5776) in versions
CC   previous to 4.8.
XX
SQ   Sequence 5142 BP; 1652 A; 1222 C; 1075 G; 1193 T; 0 other;
     AAATCTGCAT TCATAGAGAT CGGTTGTGTC GCGCGTATGC AAAAGTGATC TATTTTGCTT        60
     TATTGTTGCA ATTTCTTGGG TGCTTAAAAT AGCACTCACC AGTACATTCG GGCGCTGCTT       120
     CGTGCGGTGT CGGCATCTGG CCAACAACAA AAAGCGTTAA TCGAAGTGCG GTGTAGCTAC       180
     GATACCTGCC CTTCGGGCAA CTTATTCCCC TCACCCCGCG CAAAGCCGCT GAAGGGGGCA       240
     ATAAAATCTA TGCTTATCAG CAAAACTGAT CCGTATTTGA TCTGTTTTGT GGTCAGTTAA       300
     GCAAGCTATT TTGTAAATAT TAAGAATTAT TATTAAGACA ATGGATGAGA ACAATTCTGA       360
     TGACACCCAG CTTTTAAATA AGCAGAGTAA CCATAGAACA ATGTTCTCAA TAGCTGGCAA       420
     ATTACCTCAC GAGATTAGAA ACGAGTGCCG ATCAGCAATT CAACGCTTTA CAAGCAGCGT       480
     AACTCAAAGC AGTAGCGTCA CCACAACAAC GGTGACATTT ACTAGTGCCA ATAACAGCAC       540
     CATATATACA ATGGCAAATG CCGCAATAAG CAGCCCGTGC CTTGGAACAA GATCCACTCA       600
     CCAGGAAAGT TCCACATTGA TAAACTCCGG AATCGTAGAA GATAATCTCA GCGATGCTGC       660
     CAGAAGGTTA TTAAATGACC AAAATCAGAG AGCGGGTAAA AGGAAAAATG GAAAGCCCTT       720
     GTCCCCCATC TCCAACCCGA AAAGAGGGAG TAGCAGCCAA GTTTTACACT CGCCCCCTAC       780
     GACTAGCCTG AAGATAAGCT CTAATAATAG GTTTGCCATT CTGGACACGG ATATTTCTAC       840
     TAACGAAGAA AGCGTGGAAG GCATGATGAT AGAGGGTGCT GATATTGACA GTGCCCATAT       900
     GGATGATTCT CAACTCGATG GTTCCAATAC TGGTCGAAAC TTGCAGGAAA CACACAATAC       960
     AGCCAATCAA CTTAATGATC ACAAAAAACC ACCACAAATT GTTGTAAATA TCAGAAACTT      1020
     GAATGATCTG TTTGAGCTTA TAAAAGAAAA GACAAGCTTA GATAACGTTG TCGTTAAAGC      1080
     TAATCAAGGG GAAACGGTCA GAATATTTCC AAAAGACAGC GACACTTACA GGAAAATAGT      1140
     GAGCCATATG GATGACATTG GTATTCAGTT TCACACTTAC CAAATGCTGA CAGATAAGCC      1200
     ACACAGAATT GTAGTAAGGG ACTTACATCA CAGTACATCA AACAAAGACA TAACCGCCGA      1260
     TCTGAAATGT TTAGGCTACG AAGTGCTCCA CATTCACAAC CCTAGTTCTA GGACTAATAA      1320
     GGACGAAAAA CTAAACATCT TTTTCATTAA TATAAAGCCC TGTGCAAAAA TTAATGAAAT      1380
     TTACCATGTC AAGACCCTTT GCCGACAGAA AATACGGATT GAAAGGATGA GAAAGTCTTC      1440
     TGAAATTGCG CAATGTCGTC GTTGTCAGGA GTACGGCCAT ACAGCTAAAT ACTGCCGCAG      1500
     ACACCCAAAT TGTGCCAGAT GTGGCGAAAA TCACCAAACC ATGCAATGCA CCCGACCGAT      1560
     AGACGCACTG CCCACATGTT ACCATTGCTC TGAAAATCAT ACGGCTAGCT TCAAAGGTTG      1620
     CCTAAAGTAT CAGGAGCTTC TTCGCAGATC TATGGGGCCT GCAAGAAATG GAAACAGGTT      1680
     AAATAAGAAC ACCCATCATC ACTCTCCTAG AGACCGGCAA GAGCTTCCTG CCTTGCAGCC      1740
     CAATTACCGC AAGAACAACA CCCAATCAAC AGTACAGCAG TTATCGACAC AACCACAGCT      1800
     TAATTTTGCC CAAAGCCAAC CATCTATAGG CACTGGTGGA AACAGAGCAG TATCCTATGC      1860
     TACAGTAGTA AAAGGATACC CAAAAATAGC GCCCTCCAAG GACGGACCAG CCCAGCGTCA      1920
     ACGCTTAAAC AACCCACAAA CGAAACAAAT ACTGCAGCAA CACCGATCGA ATACACAGCA      1980
     GAATAACTCA TCTGATGTGC AAGTATTCTT ACAACAGCAA CAACAACAGT TTCTGGAATG      2040
     GCAACAGCAG ATCCAACAAC AACAACACCA ACAGTTTCTT ATGTGGTTGC AACAGCAGCA      2100
     GCAAGAACAA CTACAGTATA AAAGCCAAAC CAATCAACGA CTGGAAAAGC TTGAAAAAAT      2160
     GGTTCTTGAA CTAGCGAATA TGTTAAAAGA ATGGGCTGGG AGTGAACTTA AGCCCCAGCT      2220
     CTTTAACAAC GTCTCAGCCT CCCTATGAAT CCACTAAAGA TTCTTATTTG GAATGCTAAC      2280
     GGCATTTCAA GAAAAGCCAA AGATGTTGAG CTGTTCGCGC ACAACAAAAA GATAGACATC      2340
     CTTCTTGTGA CTGAACTAAG ACTCAAAAGA GGGGAAACTG TAAAGATATA TGGATATGCG      2400
     TACTATCCAG CATATAGGCC ATCCCTTAAT AATAATAGTG TTGGCGGAGT AGCGGTGTTC      2460
     GTGAGGACAA CTCTTCGCCA CTTTCCACAA AGGGTCATTG AGACACGCCA CATACAATTG      2520
     TCATCAGTAA AAGTAGCCAC AGGACTCGGG GACCTGCAGT TTAGCGCTAT TTACTGCTCC      2580
     CCAAGTACTA GAATCGAGGA AAGACATTTT ACTGACATAA TACGCGCCTG CGGCCAAAGG      2640
     TACTTGGTAG GTGGCGACTG GAATGCCCGC CACTGGCTTT GGGGCGACAC TTGCAATTCA      2700
     CCTCGCGGGC GGGAACTAGC AGAAGCCTTG TCCGTGACTG GAGCTAAGAT CCTCGCAACT      2760
     GGCTCTCCGA CAAGGTATCC GTATGTGCCC AGCCATACGC CCTCATGCAT AGATTTCGCA      2820
     GTGTATCATG GTATACCAGA CCACCTAGCA ACTATAACAC AAAGCTGGGA CTTGGATTCT      2880
     GATCACTTGC CTCTTATCAT TAGCATTGAG ACAGACAGTA TTCATGTCAA TCCAAGTCCC      2940
     AGGCTAGTCA CCAAACACAC TGACCTCCTT GCCTTTAGCC GACAATTGGA GAGCCTTATT      3000
     TCGCTGAACA CCACGCTTAA TTCTGGTGAG GAAATTGAAA TGGCTGTTGA CAACCTAACT      3060
     GAAAGCATAC ATAGGGCCGC GGCTGTCTCT ACTTCTCCCG TCCCTCGGAT AGGCACCACA      3120
     TATGGGATAG TCTTGACAAG AGAGGCTAGA GAGCTTCTGA CACAGAAAAG AAGACTCCGA      3180
     AGGCGAGCAA TCCGATCTCA AGACCCCTGG GACCGACTTT TATGGAACCG TGCTGCAAAG      3240
     CAACTACGAA ACGTCCTCAG AGAACTTCGA AGCAACTTTT TTGAGCAGAA ACTAGCTAGT      3300
     ATGGACTACA CAGTGGATGC TGGATACTCG CTATGGAAAT GCACCAAGTC CCTTAAAAGA      3360
     CAGCCGTTTA GACAGGTTCC TATAAGGTGT CCGGGAGGCG AACTTGCTAA AAATGAAGAG      3420
     GAGCAGGCTA ATTGTTTTGC AAATCATCTG GAGACAAGGT TCACCCACTT CCAATTCGCT      3480
     ACAACGGAGC AGTATCAAGA GACGCTTGAT AGCCTAGAGA CACCTCTGCA AATGTCACTA      3540
     CCCATTAAGC CCATCAGGGT TGAGGAAATT GTCGAAGCTA TCAAATCTCT TCCGTTAAAG      3600
     AAGTCTCCTG GCATCGACAA CGTTTGCAAT GCCACACTAA AAGCACTACC TGTTCGAGCA      3660
     ATTCTCTACT TGGCGCTGAT ATATAATGCC ATACTCAGGG TGCAGTTTTT CCCAAAGCAG      3720
     TGGAAAATGG CAGCAATCCT AATGATACAT AAGCCTGGTA AACCTGAAGA GAGCCCTGAA      3780
     TCGTACCGAC CCATAAGTCT TTTATCTTCG CTATCCAAGC TATGGGAACG ACTGATTGCC      3840
     AACAGATTAA ATGACATTAT GACCGAGCGT CGTATCCTGC CGGATCATCA GTTTGGCTTT      3900
     CGTCAGGGAC ACAGTACTGT GGAGCAGGTA CACAGACTGA CAAAACATAT CCTTCAGGCC      3960
     TTTGATGATA AGGAATACTG CAATGCTGTG TTCATTGACA TGCAACAGGC ATTCGATAGG      4020
     GTCTGGCATG ACGGCCTTAT CAGCAAAGTT AAAAAGTTAT TCCCAGCACC ATACTATGGA      4080
     GTCCTAAAAT CATACTTGGA AGATCGGAGA TTCATGGTCA GGGTCAGAAA CTCCTACTCG      4140
     ATTCCCCGCG TTATGAGAGC TGGAGTTCCG CAGGGCAGCG TACTGGGACC GTTGCTCTAC      4200
     TCAGTATTTA CTGCAGATCT GCCCTGCCCA AACGCCTATC ATATGGCAGA TCCCAGGAAG      4260
     GCCCTTCTTG CTACGTACGC TGACGATATT GCCCTGCTGT ACAGCTCTAA TTGTTGCAAC      4320
     GAGGCAGCAA GGGGTCTCCA AGAGTACCTC ACCACTCTGG CTGCATGGTG CAAAAGATGG      4380
     AATTTAAAGG TCAATCCGCA AAAGACCATC AATCCCTGCT TCACCTTGAA GACCTTAAGT      4440
     CCCGTCACCG CACCCATAGA GCTGGAAGGT GTAATCCTAG ATCAACCTTC ACAGGCTAAG      4500
     TACCTCGGGA TTACCCTTGA TAAACGGTTG ACTTTCGGCC CGCACCTGAA AGCTACGACT      4560
     CGGAGATGTT ATCAAAGGAT GCAACAACTT CGATGGCTGT TAAACAGAAA AAGCACCATG      4620
     ACACTGAGAG CCAAAAGAGC AGTCTACGTC CACTGCGTAG CCCCGATCTG GCTGTACGGA      4680
     ATACAGATCT GGGGTATCGC AGCAAAATCC AACTACAACC GCATTCAGGT ATTGCAAAAT      4740
     CGTGCCATGC GTGCAATTAC AGACTGCCCA TACTATGTAC GTGGCACTAC CCTTCACCGT      4800
     GATCTGAATC TTCATACAGT GGAAGAGCAG ATCTCCAGGC ACACCAGCAG ATATAGTGAT      4860
     AGACTAAGAC GACACCACAG TATACTTGCT AGACGCTTAC TCCCTGCTAG GCCTCTAAGG      4920
     AGATTAAAAA GGAAGGGTTT CGCCAAAACA CTTGGACAAC CCTAAAGACC CCCTCGAAAT      4980
     ATGAGACAAA GTTGTAAGTC CTCACATGAT TAGTGAGAGG TTTGGTTCTA TCTTTTATAT      5040
     GTTAATTGCG CTGTTATGTT ACTGTTATTG CATTGTATTG ATTCATCGCT TCTAAATAAA      5100
     TAATAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AA                         5142
//
ID   DMU89994   standard; DNA; INV; 6411 BP.
XX
AC   U89994;
XX
DR   FLYBASE; FBgn0010302; Burdock.
XX
FT   source          U89994:1..6411
FT   SO_feature      five_prime_LTR ; SO:0000425:1..275
FT   SO_feature      three_prime_LTR ; SO:0000426:6136..6411
FT   SO_feature      CDS ; SO:0000316:564..2057
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0043782; Burdock\gag"
FT                   /db_xref="SPTREMBL:O01350"
FT                   /protein_id="AAB50147.1"
FT                   /translation="MSDSDNLLDNLVSSLNKWSAHQASRQNSAEKNNKSSDNWWSKTKT
FT                   TSEMEFEAQLKAIVESAVAGALAVQKQSFEKQLQEMNERIGKLTVNTPEVETYVDAEIR
FT                   PGVVCSEPLDILKSLPDFDGKSETYVSWRKAAHVAFKVFKDYEGSSTFYQALGIMRNKI
FT                   KGPANTVLASFNTPLHFKAMISRLDFTYSDKRPIYLIEQELSTLRQGDMTLTEFYDEVE
FT                   KKLTLLTNKTIMTFDSALAMSLNEKYRTDALRVFVTGAKKSLSDILFAKGPKDLPTALA
FT                   LAQEVESNHERYQFALIYSKNIGDRGQKIEQRHSDKDRNSIMPMQTKNPYFSKRQVHTY
FT                   DNQERQDPVQLTNPDVSMRSRRTGNFGQTPFPTQGNIWPSQQQNSWPSQQQYSWPSQQQ
FT                   NSFRTQNQFASQPQQQNTSQAQGHFGYAQASKRPTSGSARFTGPKQQRINYLPHEKGQC
FT                   EEDTDGYQKEAEAEVDDYEDELVNYDHVHFLATNPCYRT"
FT   SO_feature      CDS ; SO:0000316:<1994..5119
FT   SO_feature      start_codon ; SO:0000318:1..3
FT                   /db_xref="FLYBASE:FBgn0043781; Burdock\pol"
FT                   /db_xref="SPTREMBL:O01351"
FT                   /protein_id="AAB50148.1"
FT                   /translation="GRTSELRSCSFFSHKSLLPYIEREIAGRTIKLLIDTGASKNYIQP
FT                   LPELKNIMPVQNKFTVKSLHGCNTVKQKCFIKLFNTSVQFFILPSLSSFDAIIGLDLLK
FT                   QGNATLDFKNKTLNINNEVESIQFLRCDSVNFANIENIVVPNQISNKFHTMLRNRLAVF
FT                   AEPEEALPYNTNIVATIRTEDDQPIYSKLYPYPMGVSDFVNKETHALLKDGIIRPSSSP
FT                   YNNPVWVVDKKGTDEEGNTKKRLVIDFRKLNLKTIDDKYPIPNVVWILSNLGKARFFTT
FT                   LDLKSAFHQILLAEKDRAKTAFSVGNGKYEFCRLPFGLKNAPSIFQRAIDDVVRDRIGK
FT                   SCYVYVDDVIIFSNGIEDHVNDVAWVLDRLSGANMRVSKEKSFFFKESVEYLGFMVSSG
FT                   GITTSPSKVEAIQKYNQPTNLFSVRSFLGLASYYRCFIKDFASIARPLTDILKGENGKV
FT                   SASQSKKIPISFDERQCSAFEKLKNVLVSENVMLLYPDYRKAFDLTTDASAFGLGAVLS
FT                   QDGKPVTMISRTLQDRELNFATNERELLAIVWALKSLRNYLYGVKNLNIFTDHQPLTYA
FT                   VSDRNPNAKIKRWKAFIDEHNAKIFYKPGKETYVADALSRQAIHVLEDEPQSDIATIHS
FT                   EISLTFTIETIDKPVNCFRNQIVIDEGTADSTRTFVIFGSKTRHLIQFLDKETLIGRIR
FT                   DVVKPDVVNAIHCELPVLAFIQNSLVNDFPATTFRHTMKMVSDIFNQTEQREIVSLEHN
FT                   RAHRAAQENVKQILQYYFFPKMSQIAATFVSNCLVCQKAKYDRHPQKQILGRTPIPSHV
FT                   GETLHIDIFSTGRNYFLTCIDKFSKFAIVQPIGSRTITDLEPAIMQLMNFFPHSKTIFC
FT                   DNEPSINSESIKSLLKNRFNVDIANAPPLHSTSNGQVERFHSTLLEIARCLKLDSGMND
FT                   TVNLILQATIEYNKTVHSVTNRRPIDIIHSTPPELANEIVEMVNEAQEKQLRRENVTRR
FT                   DRTFEVGETVMVKQNNRLGNKLTPRYREELIEADLGTTVLIKGRVVHKDNLR"
XX
CC   Derived from U89994 (g1905850) (Rel. 51, Last updated, Version 1).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 6411 BP;  2219 A; 1259 C; 1204 G; 1729 T; 0 other;
     AGTTAACACA ATCACAAAAC ACCCGAAATA TAGTCGTAAG CCTCAAGTGC TTTTCCCATC        60
     TATAGATCGA GCTTTACCTA TAAGAAACTG TAACTTGTTA AGCTTTAGAG ATAAGAACTC       120
     TTGCTATACT TAAGTCAGTC GATTTTGGAA GATTAGAAGC GTCGGTCATC GCCACGTACT       180
     TACTATTCGT CTCATTAAGT GCAGACCGCG CAAGCCTATT GTAATTAATA AACTTACGCT       240
     AATAAATATA TGGAAAATCT ACTAAAATGA TAATTGGCGC CCAAACGGAT ATAAAAACCT       300
     ACGATAACTG AATAATTATA AATAAATAAC AAAAGGAGGA TCCGGAGACA AAACCAGCGG       360
     CTTTGGCTAA TTAACTCTAA CCTAAGAAAT AAAAATTTGC TGATTACATA AAATATAATA       420
     TTAATTACTA AGACCATCTA CCTTAAAATT GTTTGTTAAT CACTATTATT ATATTGTAAG       480
     TATAACGCTT ATTGAACGAA TTAAAAATAT TATTATTATT ATTATATTAT AACCTATGCA       540
     AAGAGTATTG ATAATAAAAA TACATGAGTG ACAGTGATAA CCTTTTAGAC AACCTAGTGT       600
     CAAGCTTAAA TAAATGGTCA GCGCACCAGG CAAGTAGGCA AAACAGTGCA GAAAAAAATA       660
     ATAAGTCATC AGATAATTGG TGGTCAAAAA CAAAGACAAC TAGCGAAATG GAATTTGAAG       720
     CTCAGTTAAA AGCGATCGTA GAGAGTGCTG TTGCCGGTGC GCTCGCAGTC CAAAAACAAT       780
     CATTTGAAAA GCAATTGCAG GAGATGAATG AGCGAATCGG GAAATTAACA GTGAACACCC       840
     CAGAGGTGGA AACTTATGTA GATGCTGAAA TTAGACCAGG TGTTGTCTGT AGCGAGCCTC       900
     TAGATATACT TAAATCTCTG CCAGATTTTG ATGGCAAAAG TGAAACATAT GTGTCGTGGA       960
     GAAAAGCGGC TCATGTCGCT TTTAAAGTTT TCAAAGATTA CGAGGGAAGT TCAACATTTT      1020
     ACCAAGCTCT TGGTATTATG CGAAATAAAA TAAAAGGTCC AGCGAATACA GTATTGGCTT      1080
     CTTTTAATAC TCCGTTACAT TTCAAAGCAA TGATCAGCCG TCTTGATTTC ACATATTCTG      1140
     ACAAAAGGCC GATCTATCTA ATCGAACAAG AGCTATCAAC TTTGCGACAG GGAGACATGA      1200
     CTCTTACTGA ATTCTACGAT GAAGTCGAGA AAAAACTGAC CCTACTTACC AACAAGACAA      1260
     TAATGACATT TGATAGTGCC TTGGCGATGT CACTGAATGA AAAGTACAGG ACGGACGCGT      1320
     TACGTGTATT TGTAACCGGA GCTAAGAAAT CGTTGAGCGA CATTCTTTTT GCAAAAGGTC      1380
     CAAAAGATTT ACCAACTGCT CTCGCTTTAG CGCAAGAGGT CGAGTCGAAC CATGAGCGTT      1440
     ACCAATTCGC CCTTATTTAT TCTAAAAATA TTGGAGACAG GGGTCAGAAA ATCGAACAAA      1500
     GGCACAGCGA TAAGGATAGA AACTCAATCA TGCCCATGCA AACTAAAAAC CCATATTTTA      1560
     GCAAGCGTCA GGTGCATACT TATGATAACC AGGAAAGACA AGATCCAGTC CAGTTAACAA      1620
     ATCCTGATGT ATCCATGCGA TCTAGAAGAA CTGGAAATTT TGGACAAACT CCATTTCCGA      1680
     CTCAGGGAAA TATTTGGCCA TCCCAACAGC AAAATTCTTG GCCATCTCAA CAACAATATT      1740
     CTTGGCCATC CCAACAACAA AATTCATTTC GAACACAAAA TCAATTCGCA TCGCAACCCC      1800
     AACAGCAAAA CACAAGTCAG GCTCAGGGAC ATTTTGGGTA TGCGCAAGCA TCAAAAAGAC      1860
     CAACGAGTGG CAGTGCAAGG TTTACAGGGC CAAAACAGCA GAGGATCAAC TACTTACCTC      1920
     ATGAGAAAGG TCAATGTGAG GAAGATACAG ACGGTTATCA AAAGGAGGCA GAAGCGGAGG      1980
     TTGATGATTA TGAGGACGAA CTAGTGAATT ACGATCATGT TCATTTTTTA GCCACAAATC      2040
     CCTGCTACCG TACATAGAAA GAGAGATAGC AGGGAGAACC ATAAAACTTT TGATTGACAC      2100
     CGGGGCTTCG AAAAATTACA TACAGCCCCT CCCTGAATTA AAAAACATAA TGCCGGTACA      2160
     AAATAAATTC ACGGTAAAAT CGCTTCATGG TTGCAACACC GTCAAACAGA AATGCTTTAT      2220
     TAAGCTATTT AACACATCTG TTCAATTCTT TATTCTTCCA AGTCTCTCTA GTTTTGACGC      2280
     AATAATAGGA CTTGACCTTT TGAAACAGGG AAATGCAACG TTAGATTTTA AGAACAAAAC      2340
     GTTGAATATC AACAATGAAG TGGAATCTAT TCAGTTTTTG AGATGTGACA GCGTAAATTT      2400
     CGCCAACATA GAGAATATTG TGGTTCCAAA TCAGATATCT AATAAATTCC ATACAATGCT      2460
     TCGAAACCGA TTGGCCGTCT TTGCGGAACC GGAAGAAGCA CTGCCGTATA ATACCAACAT      2520
     TGTTGCCACA ATACGTACTG AGGACGACCA ACCCATTTAC TCAAAACTCT ATCCGTACCC      2580
     CATGGGCGTA TCGGATTTTG TGAATAAGGA GACACATGCT TTGTTAAAGG ACGGAATTAT      2640
     CAGGCCCTCG TCGTCACCTT ACAACAATCC GGTTTGGGTA GTCGATAAAA AAGGTACAGA      2700
     TGAAGAGGGA AATACTAAGA AAAGGTTGGT TATAGATTTT AGAAAACTAA ATTTAAAAAC      2760
     AATCGACGAC AAGTACCCTA TACCAAACGT AGTATGGATC TTGTCAAATT TGGGAAAAGC      2820
     CAGATTCTTT ACAACCCTTG ACCTTAAATC GGCGTTTCAC CAAATTCTGC TCGCAGAAAA      2880
     GGATAGAGCG AAAACTGCCT TTTCAGTAGG AAATGGAAAA TACGAGTTTT GCCGTTTGCC      2940
     GTTTGGCTTG AAAAATGCCC CAAGTATTTT TCAACGTGCT ATTGATGATG TTGTTAGGGA      3000
     CCGTATAGGA AAGTCATGTT ACGTTTACGT TGACGACGTA ATAATATTTT CAAACGGAAT      3060
     TGAGGACCAC GTAAACGACG TTGCTTGGGT ACTAGACAGA CTGTCTGGGG CAAACATGAG      3120
     GGTTTCTAAA GAGAAATCGT TTTTCTTCAA GGAAAGCGTC GAGTATCTCG GATTCATGGT      3180
     GTCAAGTGGA GGTATCACAA CCAGTCCTAG CAAAGTAGAG GCTATTCAGA AATATAATCA      3240
     ACCTACTAAT CTGTTTAGTG TTCGATCGTT TTTAGGGCTA GCAAGTTATT ACCGCTGCTT      3300
     TATTAAGGAC TTCGCCTCTA TTGCTAGACC ACTCACTGAC ATTCTGAAGG GTGAAAACGG      3360
     AAAGGTTTCC GCAAGCCAGT CTAAAAAGAT ACCAATTTCT TTCGATGAAA GACAATGTTC      3420
     TGCTTTTGAG AAGCTTAAAA ATGTTCTTGT CTCCGAAAAT GTAATGTTAT TGTATCCCGA      3480
     TTATAGAAAA GCCTTTGACT TAACAACAGA CGCTTCGGCT TTTGGCCTGG GGGCAGTCTT      3540
     ATCACAGGAT GGCAAGCCTG TTACAATGAT TTCGAGAACT TTACAGGATA GAGAACTTAA      3600
     TTTCGCAACA AATGAACGAG AACTTTTGGC CATCGTTTGG GCTTTAAAGT CTCTTAGGAA      3660
     CTATCTATAT GGTGTCAAAA ACTTAAACAT TTTTACAGAT CACCAGCCGT TAACATACGC      3720
     CGTGTCAGAT AGGAATCCAA ATGCAAAAAT CAAGAGATGG AAGGCGTTTA TAGACGAACA      3780
     TAATGCTAAA ATTTTCTATA AACCTGGCAA GGAGACCTAT GTTGCCGATG CACTATCCAG      3840
     GCAGGCTATT CATGTCCTAG AGGACGAACC CCAGTCAGAC ATTGCAACAA TACATAGCGA      3900
     AATTTCATTG ACTTTTACAA TCGAAACTAT CGACAAGCCG GTTAACTGTT TTAGAAACCA      3960
     AATTGTGATA GATGAGGGCA CCGCAGACTC AACTCGAACT TTTGTTATTT TCGGAAGCAA      4020
     GACAAGGCAT CTAATACAGT TTCTAGACAA AGAGACCTTA ATCGGAAGAA TTCGTGATGT      4080
     GGTTAAGCCG GATGTAGTGA ATGCGATACA CTGCGAATTA CCTGTACTAG CTTTCATTCA      4140
     AAACAGTCTT GTAAATGACT TTCCAGCAAC AACCTTCCGA CACACTATGA AAATGGTCAG      4200
     CGACATTTTT AATCAAACTG AGCAACGGGA AATAGTGTCT TTGGAGCACA ACAGAGCGCA      4260
     TAGGGCAGCA CAGGAGAATG TAAAACAAAT TCTTCAATAC TACTTTTTCC CTAAAATGTC      4320
     ACAAATAGCC GCTACCTTTG TTTCTAACTG CTTGGTTTGT CAAAAAGCCA AATACGACCG      4380
     CCATCCGCAA AAGCAAATCC TCGGGAGAAC ACCTATTCCG TCACATGTAG GCGAGACATT      4440
     GCATATTGAT ATATTTTCTA CGGGCAGGAA TTACTTTTTG ACATGTATTG ACAAATTTTC      4500
     CAAATTCGCT ATTGTGCAAC CAATCGGCTC TCGAACGATA ACTGATTTAG AACCTGCAAT      4560
     TATGCAACTA ATGAACTTTT TTCCCCATTC AAAGACAATA TTTTGTGACA ATGAACCGTC      4620
     CATAAATTCC GAGTCAATCA AGTCACTTTT GAAAAATCGT TTTAATGTTG ACATAGCGAA      4680
     CGCACCTCCA CTTCATAGTA CCTCAAACGG ACAGGTTGAA AGGTTTCACA GCACGCTTTT      4740
     AGAAATAGCT CGATGCCTGA AACTTGACAG TGGAATGAAT GATACAGTCA ACCTTATTCT      4800
     TCAGGCAACA ATAGAATACA ATAAGACGGT GCACTCAGTC ACCAATAGAA GACCGATCGA      4860
     CATTATTCAT TCAACTCCTC CCGAATTGGC TAACGAGATA GTAGAAATGG TTAACGAAGC      4920
     TCAGGAAAAA CAGCTAAGAA GAGAAAATGT AACAAGACGA GACAGAACCT TTGAGGTGGG      4980
     AGAAACCGTC ATGGTAAAAC AAAACAATCG CTTGGGAAAT AAACTAACCC CACGGTATAG      5040
     GGAAGAACTA ATCGAAGCAG ACCTCGGGAC AACGGTCCTC ATAAAAGGGA GGGTCGTTCA      5100
     TAAAGATAAT CTACGCTAGG TTTAGTATTT CTTTTCCTTT TGTGACCATC GCCAAGTTAG      5160
     CAAAATACAA ACGTGAAATC TGAACACTAG TAAAAGAGTT TGCAAACATT TTTCAATTAA      5220
     ATATTTGTCA AATCCTTCTT ATTTAATCTT TAAACATTTT GTATTATTTC CGCTTCATCC      5280
     TCTTTAGAAA ATTTTAAAGG TATGTGATGA AATGCTAGAC CCGAATGATT TGAAAACTTA      5340
     AAGTCCACGC AACCACAAAT ATTTCCTGAA ACTACCATAG AAAATAAATG CATTACCAAA      5400
     ACGGCATAAT AACAGTATAG CGCACTCACT CTAATTAGAT TTCAAATTCC CGATTAAAAA      5460
     AAAAATAAAA CACTAATGTT ATCAATACCC TTTCCTGATT CTGTTCAACT AAAATAGGAA      5520
     AATCAATACT TGCAATCAAT AAGCGTTTTA CTACATACTT TAATATCAAA ATATCTGAAT      5580
     GAACTTTATT ATAAAATTAT AATTGTTATA CTTAATTATT GTCAAAACTT TAGTATTAAA      5640
     ACTGTAACTA CCTCTTAAGT AGATGAGAAG AGTAGAAGAG GGAATTAAGA TCTATCAACG      5700
     TAGTATCTGC TAAAGACGTA AAGATGCGGC AACTATTTCT GCGCCTGGGT ACTGAAACGA      5760
     CGAACTGAAT AATATCTGCC ATCAGACGCC AACCAGAGTG CGTTCAACAC ATACGTTTTG      5820
     ATGGTCAACT AGTTCAACCA ACATCAGCAT CATCGTCGTC AACAAGTCGA CGGTTACAAT      5880
     AAAGATTTTT TCCAAGTTCG CTACGATCAT CTCCAGAACC TTGTTGCGAA CCCATGACAT      5940
     GGAGAATCAG CAGCATTTAC GAACTTCTCG GATCATCCAG ACACGCAGAG CTGCCTTCCC      6000
     TTCGATGGTT TAACGCAGTA CCAGGTTGGC AGTATGGGAA CTTAGTGCAC AACCAATGTT      6060
     ACCCGTAAGA TCCGCTTTCA AATAGATTTG CCAATTGTAA AAAGTCTGTG GACAGCCTTC      6120
     GTCTTAGAAG GGGAGGAGTT AACACAATCA CAAAACACCC GAAATATAGT CGTAAGCCTC      6180
     AAGTGCTTTT CCCATCTATA GATCGAGCTT TACCTATAAG AAACTGTAAC TTGTTAAGCT      6240
     TTAGAGATAA GAACTCTTGC TATACTTAAG TCAGTCGATT TTGGAAGATT AGAAGCGTCG      6300
     GTCATCGCCA CGTACTTACT ATTCGTCTCA TTAAGTGCAG ACCGCGCAAG CCTATTGTAA      6360
     TTAATAAACT TACGCTAATA AATATATGGA AAATCTACTA AAATGATAAT T               6411
//
ID   DMCOPIA    standard; DNA; INV; 5143 BP.
XX
AC   X02599;
XX
DR   FLYBASE; FBgn0000349; copia.
XX
FT   source          X02599:21..5163
FT   SO_feature      five_prime_LTR ; SO:0000425:1..276
FT   SO_feature      three_prime_LTR ; SO:0000426:4867..5143
FT   SO_feature      polyA_signal_sequence ; SO:0000551:1990..1999
FT   SO_feature      polyA_signal_sequence ; SO:0000551:5063..5073
FT   SO_feature      primer_binding_site ; SO:0005850:277..291
FT                   /bound_moiety="tRNA:M-i-RB"
FT   SO_feature      CDS ; SO:0000316:432..4661
FT                   /db_xref="FLYBASE:FBgn0013437; copia\GIP"
FT                   /db_xref="SWISS-PROT:P04146"
FT                   /protein_id="CAA26444.1"
FT                   /translation="MDKAKRNIKPFDGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVD
FT                   DSWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLL
FT                   SLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLS
FT                   EENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIF
FT                   KGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNT
FT                   SVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRND
FT                   HEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPV
FT                   INFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPC
FT                   LNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTY
FT                   LIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVP
FT                   HTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKT
FT                   PYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEK
FT                   FIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDN
FT                   IQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKR
FT                   DDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNE
FT                   EDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPE
FT                   NKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILS
FT                   LVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGISCNSDNVCKLNKAIYGLKQAARCW
FT                   FEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRY
FT                   LMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKI
FT                   NYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVL
FT                   RYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTK
FT                   RQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPS
FT                   CHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLLQ
FT                   DDQSNAE"
FT   SO_feature      CDS ; SO:0000316:join(432..1605,4555..4661)
FT                   /db_xref="FLYBASE:; copia\GIP-RB"
FT                   /db_xref="SWISS-PROT:P04146"
FT                   /protein_id="CAA26445.1"
FT                   /translation="MDKAKRNIKPFDGEKYAIWKFRIRALLAEQDVLKVVDGLMPNEVD
FT                   DSWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLL
FT                   SLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLS
FT                   EENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIF
FT                   KGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNT
FT                   SVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRND
FT                   HEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSENQLADIF
FT                   TKPLPAARFVELRDKLGLLQDDQSNAE"
XX
CC   Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4).
CC   Takis Benos and Michael Ashburner, 20-Aug-1997.
CC   Any changes to original sequence record are annotated in an FT line.
XX
SQ   Sequence 5143 BP;  1874 A; 727 C; 971 G; 1571 T; 0 other;
     TGTTGGAATA TACTATTCAA CCTACAAAAA TAACGTTAAA CAACACTACT TTATATTTGA        60
     TATGAATGGC CACACCTTTT ATGCCATAAA ACATATTGTA AGAGAATACC ACTCTTTTTA       120
     TTCCTTCTTT CCTTCTTGTA CGTTTTTTGC TGTGAGTAGG TCGTGGTGCT GGTGTTGCAG       180
     TTGAAATAAC TTAAAATATA AATCATAAAA CTCAAACATA AACTTGACTA TTTATTTATT       240
     TATTAAGAAA GGAAATATAA ATTATAAATT ACAACAGGTT ATGGGCCCAG TCCATGCCTA       300
     ATAAACAATT AAATTGTGAA TTAAAGATTG TGAAAATAAA TTGTGAAATA GCATTTTTTC       360
     ACATTCTTGT GAAATAGCTT TTTTTTTCAC ATTCTTGTGA AATTATTTCC TTCTCAGAAT       420
     TTGAGTGAAA AATGGACAAG GCTAAACGTA ATATTAAGCC GTTTGATGGC GAGAAGTACG       480
     CGATTTGGAA ATTTAGAATT AGGGCTCTTT TAGCCGAGCA AGATGTGCTT AAAGTAGTTG       540
     ATGGTTTAAT GCCTAACGAG GTAGATGACT CCTGGAAAAA GGCAGAGCGT TGTGCAAAAA       600
     GTACAATAAT AGAGTACCTA AGCGACTCGT TTTTAAATTT CGCAACAAGC GACATTACGG       660
     CGCGTCAGAT TCTTGAGAAT TTGGACGCCG TTTATGAACG AAAAAGTTTG GCGTCGCAAC       720
     TGGCGCTGCG AAAACGTTTG CTTTCTCTGA AGCTATCGAG TGAGATGTCA CTATTAAGCC       780
     ATTTTCATAT TTTTGACGAA CTTATAAGTG AATTGTTGGC AGCTGGTGCA AAAATAGAAG       840
     AGATGGATAA AATTTCTCAT CTACTGATCA CATTGCCTTC GTGTTACGAT GGAATTATTA       900
     CAGCGATAGA GACATTATCT GAAGAAAATT TGACATTGGC GTTTGTGAAA AATAGATTGC       960
     TGGATCAAGA AATTAAAATT AAAAATGACC ACAACGATAC AAGCAAGAAA GTTATGAACG      1020
     CGATCGTGCA CAACAATAAT AACACTTATA AAAATAATTT GTTTAAAAAT CGGGTAACTA      1080
     AACCAAAGAA AATATTCAAG GGAAATTCAA AGTATAAAGT CAAGTGTCAC CACTGTGGCA      1140
     GAGAAGGCCA CATTAAAAAA GATTGTTTCC ATTATAAAAG AATATTAAAT AATAAAAATA      1200
     AAGAAAATGA AAAACAAGTT CAAACTGCAA CATCACACGG CATTGCGTTT ATGGTAAAAG      1260
     AAGTGAATAA TACTTCAGTG ATGGACAACT GCGGGTTTGT CCTTGATTCT GGTGCTAGTG      1320
     ACCATCTTAT AAATGATGAG TCGCTGTATA CCGACAGTGT GGAGGTTGTG CCTCCACTTA      1380
     AGATTGCAGT GGCCAAGCAA GGCGAATTTA TTTATGCCAC TAAGCGTGGT ATTGTCCGAC      1440
     TACGGAATGA CCATGAGATT ACACTGGAGG ATGTACTCTT TTGTAAGGAA GCTGCTGGTA      1500
     ATTTGATGTC CGTAAAGCGT CTCCAAGAGG CAGGAATGTC GATCGAATTT GACAAAAGCG      1560
     GTGTAACCAT TTCGAAAAAT GGGTTAATGG TTGTCAAAAA TTCAGGTATG TTAAACAATG      1620
     TACCTGTGAT CAATTTTCAA GCATATTCTA TAAATGCTAA GCATAAAAAT AATTTTCGTT      1680
     TATGGCATGA GAGGTTTGGC CATATAAGCG ATGGCAAATT ATTAGAAATA AAACGAAAGA      1740
     ATATGTTTAG TGATCAAAGT CTTCTAAACA ACTTAGAGTT ATCATGTGAA ATTTGTGAAC      1800
     CCTGTTTAAA TGGTAAACAG GCAAGACTTC CTTTTAAACA ATTGAAAGAT AAGACCCATA      1860
     TTAAAAGACC ACTTTTTGTA GTACACTCAG ATGTCTGTGG GCCTATTACT CCAGTTACTT      1920
     TAGATGATAA AAATTATTTT GTGATCTTTG TTGATCAGTT TACACATTAT TGTGTAACTT      1980
     ATTTAATTAA ATATAAATCT GATGTGTTTA GCATGTTTCA AGATTTTGTA GCCAAGAGTG      2040
     AAGCTCATTT TAATTTAAAG GTTGTGTACT TATACATTGA CAATGGTAGA GAATACTTGT      2100
     CAAATGAGAT GAGACAATTT TGTGTTAAGA AAGGAATTTC TTATCACTTA ACAGTGCCAC      2160
     ATACACCTCA GTTAAATGGT GTTTCTGAGA GAATGATAAG AACCATTACG GAAAAAGCTC      2220
     GAACCATGGT TAGTGGTGCA AAGCTAGATA AAAGCTTTTG GGGCGAAGCA GTATTAACTG      2280
     CTACTTATTT AATCAACAGA ATTCCTAGTA GAGCACTTGT TGATAGTTCA AAGACCCCAT      2340
     ATGAGATGTG GCACAATAAG AAGCCATACT TAAAACATTT GAGAGTGTTT GGTGCAACTG      2400
     TTTATGTGCA TATTAAAAAC AAACAAGGAA AGTTTGATGA TAAATCATTT AAAAGTATTT      2460
     TTGTGGGCTA TGAACCCAAT GGTTTTAAGT TGTGGGATGC TGTAAATGAA AAATTTATTG      2520
     TCGCAAGAGA TGTTGTTGTC GATGAAACCA ATATGGTTAA TTCTAGAGCT GTTAAATTTG      2580
     AAACAGTGTT CCTGAAAGAT AGTAAGGAAA GTGAAAATAA AAATTTTCCG AATGACAGTA      2640
     GGAAAATAAT ACAAACAGAA TTCCCGAATG AGAGTAAGGA ATGCGACAAC ATACAATTCC      2700
     TGAAAGATAG TAAGGAAAGT GAAAATAAAA ATTTTCCGAA TGACAGTAGG AAAATAATAC      2760
     AAACAGAATT CCCGAATGAG AGTAAGGAAT GCGACAACAT ACAATTCCTG AAAGATAGTA      2820
     AGGAAAGTAA TAAATATTTT CTGAATGAGA GTAAGAAAAG AAAGCGAGAT GATCACCTGA      2880
     ATGAAAGTAA GGGATCAGGC AACCCGAATG AGAGTAGGGA AAGTGAAACA GCAGAGCACT      2940
     TAAAAGAAAT TGGAATTGAT AATCCAACTA AAAATGATGG CATAGAAATT ATTAATAGAA      3000
     GAAGTGAGAG ATTAAAGACT AAGCCTCAGA TATCCTATAA TGAAGAGGAT AATAGTCTAA      3060
     ATAAAGTTGT TCTAAATGCT CACACTATAT TTAACGATGT CCCAAATTCA TTTGATGAAA      3120
     TTCAATATAG GGATGATAAA TCTTCTTGGG AAGAAGCCAT CAATACAGAG TTAAATGCTC      3180
     ATAAAATTAA TAATACTTGG ACAATTACAA AAAGGCCTGA AAACAAAAAT ATTGTAGATA      3240
     GCAGATGGGT ATTTTCTGTT AAATATAATG AACTTGGAAA TCCAATTAGA TACAAAGCTA      3300
     GATTGGTTGC ACGAGGATTC ACTCAAAAAT ACCAAATAGA CTATGAAGAG ACATTTGCTC      3360
     CTGTAGCTAG AATTTCAAGT TTCCGATTTA TATTGTCATT AGTAATACAG TATAACTTGA      3420
     AAGTCCATCA AATGGATGTA AAAACAGCTT TCTTAAATGG CACGTTAAAA GAGGAAATTT      3480
     ATATGAGACT TCCTCAAGGT ATATCGTGTA ATAGTGACAA TGTGTGTAAA TTGAATAAGG      3540
     CAATTTACGG ACTCAAGCAA GCGGCTAGAT GCTGGTTTGA AGTATTTGAG CAAGCATTGA      3600
     AAGAGTGTGA GTTTGTAAAC TCTTCAGTTG ATCGCTGTAT ATATATTTTA GACAAAGGTA      3660
     ACATCAATGA AAACATATAT GTATTATTAT ATGTAGATGA TGTGGTTATA GCTACAGGAG      3720
     ATATGACAAG AATGAATAAC TTCAAAAGGT ATTTAATGGA AAAGTTTAGG ATGACTGACC      3780
     TAAATGAAAT AAAACATTTT ATTGGAATTA GGATAGAGAT GCAGGAAGAT AAAATCTATT      3840
     TAAGCCAATC TGCATATGTT AAAAAAATTT TAAGTAAATT TAACATGGAA AATTGTAATG      3900
     CAGTTAGTAC TCCTTTACCT AGTAAAATAA ATTATGAATT ACTTAATTCA GATGAAGACT      3960
     GCAATACCCC ATGCCGTAGC CTCAT