PPR { RETE|ID 1 FBpp0001256 SYM 1 shi+P-exon AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 4 Feb 1998 RESZ 259 ID|FBpp0001256 SYM|shi+P-exon ASAL|FBal0071044==shi+ DT|4 Feb 1998 |4 Feb 1998 ASGN|FBgn0003392==shi REFDSR { RDID|FBrf0105495 |FlyBase |1992- CC|alternative 3' exon } REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0001540 SYM 1 gsb+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 5 Nov 1999 RESZ 470 ID|FBpp0001540 SYM|gsb+PA SYN|gsb-d+PA ASAL|FBal0100470==gsb+ DT|5 Nov 1999 |10 Mar 1998 ASGN|FBgn0001148==gsb REFDSR { RDID|FBrf0064406 |Chu-LaGraff and Doe |1993 BODP|gsb-d protein was used as a neuroblast marker. It is expressed in rows 5 | and 6/7 neuroblasts. CVBODP| E neuroblast | row 5

| E neuroblast | row 6/7

} REF { REFM|FBrf0064406 |Chu-LaGraff and Doe |1993 } } # EOR PPR { RETE|ID 1 FBpp0001553 SYM 1 Aldh+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 450 ID|FBpp0001553 SYM|Aldh+PA ASAL|FBal0066370==Aldh+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0012036==Aldh REFDSR { RDID|FBrf0058677 |Leal and Barbancho |1993 PCL|Acetaldeyhde dehyrogenase activity from the FBgn0012036==Aldh gene is mainly cytosolic | in adults though some is located in the mitochondria. CVCEL|cytoplasm |mitochondrion } REF { REFM|FBrf0058677 |Leal and Barbancho |1993 } } # EOR PPR { RETE|ID 1 FBpp0001554 SYM 1 PC-Pld+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 435 ID|FBpp0001554 SYM|PC-Pld+PA ASAL|FBal0068143==PC-Pld+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0013310==PC-Pld REFDSR { RDID|FBrf0058680 |Miller et al. |1993 CC|Dietary alcohols at low to moderate levels increase | phosphatidylcholine-specific phospholipase D in larvae. PC-PLD activity was | enhanced by Ca[2+] and by GTP-&ggr;S in vitro. } REF { REFM|FBrf0058680 |Miller et al. |1993 } } # EOR PPR { RETE|ID 1 FBpp0001619 SYM 1 pnt+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 2 DT 1 20 Mar 1998 RESZ 459 ID|FBpp0001619 SYM|pnt+PA ASAL|FBal0070902==pnt+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003118==pnt REFDSR { RDID|FBrf0057432 |Lautenberger et al. |1992 CC|The amino acid sequences of various Ets gene family members were studied | to determine evolutionary relatedness. Phylogenetic trees were derived. } REF { REFM|FBrf0047835 |Pribyl et al. |1988 REFM|FBrf0057432 |Lautenberger et al. |1992 } } # EOR PPR { RETE|ID 1 FBpp0001628 SYM 1 Mhc+PB AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 385 ID|FBpp0001628 SYM|Mhc+PB ASAL|FBal0068063==Mhc+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0002741==Mhc REFDSR { RDID|FBrf0046579 |Wassenberg et al. |1987 ASTR|FBtr0000111==Mhc+RA CC|Predicted from sequence data (J02788). Encoded by transcript containing exon 3a. } REF { REFM|FBrf0046579 |Wassenberg et al. |1987 } } # EOR PPR { RETE|ID 1 FBpp0001629 SYM 1 Mhc+PC AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 385 ID|FBpp0001629 SYM|Mhc+PC ASAL|FBal0068063==Mhc+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0002741==Mhc REFDSR { RDID|FBrf0046579 |Wassenberg et al. |1987 ASTR|FBtr0000112==Mhc+RB CC|Predicted from sequence data (J02788). Encoded by transcript containing exon 3b. } REF { REFM|FBrf0046579 |Wassenberg et al. |1987 } } # EOR PPR { RETE|ID 1 FBpp0001632 SYM 1 ct+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 5 DT 1 23 Apr 2001 RESZ 6274 ID|FBpp0001632 SYM|ct+P ASAL|FBal0068792==ct+ DT|23 Apr 2001 |10 Mar 1998 ABODURL|2b10.html 2B10 ASGN|FBgn0004198==ct REFDSR { RDID|FBrf0048770 |Blochlinger et al. |1988 ABOD|polyclonal PCL|Within a simple external sensory organ, the nuclei of the tormogen and | trichogen cells express FBgn0004198==ct protein strongly, while the thecogen cells and | neurons are not consistently labeled. BODP|All external sensory organs of the embryo, including the antenno-maxillary | complex and the external sensory organs in the spiracles, express FBgn0004198==ct | protein. Staining is visible before morphological differentiation of cells | of the external sensory organs at stage 11-12 of embryogenesis. Additional | tissues which express the FBgn0004198==ct protein include some neurons with multiple | dendritic arborizations, and cells lining the Malpighian tubules. ASM|immunolocalization CVBODP|immunolocalization | E external sensory organ

CVCEL|nucleus } REFDSR { RDID|FBrf0051828 |Blochlinger et al. |1990 ABOD|polyclonal BODP|In the 5-6 hour embryo, FBgn0004198==ct protein is expressed in sensory precursor | cells, which will give rise to the external sensory organs. FBgn0004198==ct protein | appears in many putative external sensory organ precursors in 5-10 hour | embryos, starting with the position of the double innervated sensillum | trichoideum and sensillum campaniformium (des2 and v'es2) in abdominal | segments, and the basiconical sensilla (les3, v'es3) in the thoracic | segments. In most external sensory organs at late embryogenesis, the | trichogen and tormogen label more intensely for FBgn0004198==ct protein than the | neuron and thecogen. Some CNS cells, the Malpighian tubules, and cells | surrounding the anterior and posterior spiracles express FBgn0004198==ct protein | starting at 5-7 hours of embryogen sis. ASM|immunolocalization CVBODP|immunolocalization | E | >5-6 hr external sensory organ

E | 5-6 hr des2 neuron

| E | 5-6 hr v'es2 neuron

| E | 5-6 hr les3 neuron

| E | 5-6 hr v'es3 neuron

| E | 6-7 hr desC neuron

| E | 6-7hr desD neuron

| E | 8 hr desB neuron

| E | 8 hr lesC neuron

| E | 8 hr lesB neuron

| E | 8 hr lesA neuron

| E | 8 hr v'esA neuron

| E | 8 hr vesC neuron

| E | 10 hr v'esB neuron

| E | 10 hr v'esC neuron

| E | 10 hr vesB neuron

E | >5-6 hr embryonic/larval posterior spiracle | surrounding

| E | >5-6 hr embryonic/larval anterior spiracle | surrounding

| E | >5-6 hr Malpighian tubule

| E | >6-7 hr embryonic central nervous system | presumptive | restricted

CVCEL|nucleus CC|When the complete FBgn0004198==ct coding sequence is expressed under the control of a | heat shock promoter, 320 kD and 280 kD bands are observed on a Western | blot. The same two protein sizes are detected in Western blots of wild type embryos. } REFDSR { RDID|FBrf0058084 |Blochlinger et al. |1993 BODP|FBgn0004198==ct protein accumulation from larval through adult stages was studied by | immunolocalization. FBgn0004198==ct protein is found in diverse tissues, including the | wing and leg discs, muscle, ovarian follicle cells, and the central nervous | system. In many tissues, FBgn0004198==ct protein is expressed in a subset of cells. In | many cases, it is found in precursors, and persists in differentiated | cells. In the third instar larval wing disc, FBgn0004198==ct protein is first detected | in regions corresponding to the prospective notum, wing blade, and wing | hinge. In the first 2 hours of puparium formation, FBgn0004198==ct protein expression | is detected in the distal anterior wing margin where, by 6 hours, FBgn0004198==ct | protein is detected in the chemosensory organ cells. At 24 hours of | pupariat on, expression is also detected in macrochaetae and microchaetae | of the notum. The prospective wing margin stains from third larval instar | through 24 hours of pupa formation. Regions of the leg disc which will give | rise to the tarsus and to pioneer neurons express FBgn0004198==ct protein from third | larval instar through 3 hour pupae. Malpighian tubules, ovarian follicle | cells from stage S2 to S14, larval adepithelial cells and adult muscles of | the thorax, head and abdomen are among tissues which express FBgn0004198==ct protein. | Structures of the adult head which express FBgn0004198==ct protein include the cortex | of medulla and lobulla, and the neuropil. The interommatidial bristle | precursors and cone cell precursors of 24 hour pupal eye discs, and adult | cone cells also contain FBgn0004198==ct protein. ASM|immunolocalization CVBODP|immunolocalization | L | third instar dorsal mesothoracic disc | restricted

| L | third instar ventral thoracic disc | restricted

| PP | 0-2 hr chemosensory sensory organ | precursor dorsal mesothoracic disc

| P | 6 hr chemosensory sensory organ dorsal mesothoracic disc

| P | 24 hr microchaetae

| P | 24 hr macrochaetae

| P | 24 hr interommatidial bristle | precursor

| L | third instar tarsus | precursor

| L | third instar pioneer neuron | precursor

| PP | 3 hr tarsus | precursor

| PP | 3 hr pioneer neuron | precursor

| A Malpighian tubule

| O,A | stage S2-S14 follicle cell

| L | third instar adepithelial cell

| A adult muscle system

| A medulla cortex

| A lobula plate cortex

| L-A cone cell

} REFDSR { RDID|FBrf0129996 |Nolo et al. |2000 MRK|thecogen cell } REF { REFM|FBrf0048770 |Blochlinger et al. |1988 REFM|FBrf0051828 |Blochlinger et al. |1990 REFM|FBrf0057354 |Neufeld et al. |1992 REFM|FBrf0058084 |Blochlinger et al. |1993 REFM|FBrf0129996 |Nolo et al. |2000 } } # EOR PPR { RETE|ID 1 FBpp0001638 SYM 1 Mhc+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 1341 ID|FBpp0001638 SYM|Mhc+P ASAL|FBal0068063==Mhc+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0002741==Mhc REFDSR { RDID|FBrf0050538 |George et al. |1989 CC|At least 480 FBgn0002741==Mhc isoforms are theoretically encoded by the gene when all | the different possible combinations of alternate exons are considered. The | alternative exons encode sequences close to or within regions thought to | have important structural or enzymatic functions. Putative functional | domains and regions of exceptional sequence conservation, however, are most | often distributed in both alternative and common exons. Some of the | characterized domains map to exons as follows: a conserved hydrophobic | pocket sequence in exons 3-4, the highly conserved ATP-binding domain in | exon 4, the highly divergent proteolytic cleavage site that defines the | 25-50kD junction in exon 4, two highly conserved regions of unidentified | function in exons 4-6 and 8-9, the 50-20kD junction in exon 10, the primary | actin-binding site in exon 10, a secondary actin-binding site in exon 11, | the sites of myosin light chain binding in exon 12, the head-tail junction | in exon 12, the hinge region in exons 14-16, and the non-coiled tailpiece | in exons 17-19. } REF { REFM|FBrf0050538 |George et al. |1989 } } # EOR PPR { RETE|ID 1 FBpp0001639 SYM 1 Pc+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 794 ID|FBpp0001639 SYM|Pc+PA ASAL|FBal0068148==Pc+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003042==Pc REFDSR { RDID|FBrf0050645 |Zink and Paro |1989 ABOD|polyclonal CC|FBgn0003042==Pc protein is associated with ~60 sites on the polytene chromosomes. It is | associated with loci shown to interact with FBgn0003042==Pc by genetic methods. It is | abundant at the ANT-C and the BX-C and is found at several locations of | FBgn0003042==Pc-group genes. The FBgn0003042==Pc protein expressed in salivary glands is encoded | by a 1.0kb FBgn0003042==Pc transcript and is smaller than the 390aa FBgn0003042==Pc protein. } REF { REFM|FBrf0050645 |Zink and Paro |1989 } } # EOR PPR { RETE|ID 1 FBpp0001640 SYM 1 Gpdh+P AAL 1 866 PSZ 1 - HG 1 - DBA 1 - REF 1 5 DT 1 31 Dec 1998 RESZ 1997 ID|FBpp0001640 SYM|Gpdh+P ASAL|FBal0067849==Gpdh+ DT|31 Dec 1998 |10 Mar 1998 ASGN|FBgn0001128==Gpdh REFDSR { RDID|FBrf0051226 |Lissemore et al. |1990 BODP|FBgn0001128==Gpdh activity increases nearly fourfold when dietary sucrose is increase | from 0.1% to 10%. Glucose, fructose, or starch at a 5% concentration also | lead to a 2-3-fold increase in FBgn0001128==Gpdh activity. FBgn0001128==Gpdh activity increases | with increasing ethanol. Sucrose and ethanol together have an additive | effect on FBgn0001128==Gpdh activity. ASM|enzyme assay or biochemical detection } REFDSR { RDID|FBrf0057573 |Li |1992 AAL|866 CC|The quantities of six out of seven enzymes tested were higher in FBal0000314==Adh[F] | homozygotes than in FBal0000321==Adh[S] homozygotes. Levels were significantly higher | at the 0.001 level for FBgn0000055==Adh, FBgn0001091==Gapdh1, and FBgn0003076==Pgm and higher at the 0.05 | level for FBgn0001128==Gpdh. FBgn0001248==Idh levels were not increased in FBal0000314==Adh[F] flies. } REFDSR { RDID|FBrf0059165 |Hoshino et al. |1993 CC|The quantities of six out of seven enzymes tested were higher in FBal0000314==Adh[F] | homozygotes than in FBal0000321==Adh[S] homozygotes. Levels were significantly higher | at the 0.001 level for FBgn0000055==Adh, FBgn0001091==Gapdh1, and FBgn0003076==Pgm and higher at the 0.05 | level for FBgn0001128==Gpdh. FBgn0001248==Idh levels were not increased in FBal0000314==Adh[F] flies. } REF { REFM|FBrf0044670 |Cook et al. |1986 REFM|FBrf0049550 |Sanchez-Herrero and Akam |1989 REFM|FBrf0051226 |Lissemore et al. |1990 REFM|FBrf0057573 |Li |1992 REFM|FBrf0059165 |Hoshino et al. |1993 } } # EOR PPR { RETE|ID 1 FBpp0001651 SYM 1 Nrg+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 879 ID|FBpp0001651 SYM|Nrg+P ASAL|FBal0068125==Nrg+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0002968==Nrg REFDSR { RDID|FBrf0052686 |Hortsch et al. |1990 ABOD|monoclonal BODP|A monoclonal antibody which recognizes both forms of the FBgn0002968==Nrg protein | detects FBgn0002968==Nrg protein in neurons of the central nervous system and | peripheral nervous system of the embryo, as well as in epidermal cells and | neurons of thirdinstar larval imaginal discs. ASM|immunolocalization CVBODP|immunolocalization | E | >6 hr central nervous system | restricted

| E | >=7 hr embryonic peripheral nervous system | restricted

| L | third instar neuron imaginal disc

| L | third instar epidermis imaginal disc

} REF { REFM|FBrf0052686 |Hortsch et al. |1990 } } # EOR PPR { RETE|ID 1 FBpp0001662 SYM 1 ovo+PA AAL 1 - PSZ 1 131 HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 528 ID|FBpp0001662 SYM|ovo+PA ASAL|FBal0070857==ovo+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003028==ovo REFDSR { RDID|FBrf0053878 |Mevel-Ninio et al. |1991 PSZ|131 | predicted CC|The FBgn0003028==ovo protein is at least 1209 amino acids long. In addition to four | zinc finger repeats, the protein contains homopolymeric runs of several | different amino acids, and has an extremely hydrophilic amino acid profile. } REF { REFM|FBrf0053878 |Mevel-Ninio et al. |1991 } } # EOR PPR { RETE|ID 1 FBpp0001667 SYM 1 Psc+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 200 ID|FBpp0001667 SYM|Psc+PA ASAL|FBal0068204==Psc+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0005624==Psc REF { REFM|FBrf0054776 |van Lohuizen et al. |1991 } } # EOR PPR { RETE|ID 1 FBpp0001670 SYM 1 Shal+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 833 ID|FBpp0001670 SYM|Shal+P ASAL|FBal0074236==Shal+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0005564==Shal REFDSR { RDID|FBrf0054816 |Covarrubias et al. |1991 CC|Co-injection experiments in Xenopus oocytes were used to test for formation | of functional heterodimers between FBgn0003380==Sh subfamily members. In fact, no | functional heterodimers (as shown by novel current kinetics) were detected | when all pairwise combinations of the four different channel subfamilies | (FBgn0003380==Sh, FBgn0003383==Shab, FBgn0005564==Shal, and FBgn0003386==Shaw) were tested. The | independence of each channel system was retained even when all four were co-expressed. } REF { REFM|FBrf0054816 |Covarrubias et al. |1991 } } # EOR PPR { RETE|ID 1 FBpp0001687 SYM 1 Psc+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 1683 ID|FBpp0001687 SYM|Psc+P ASAL|FBal0068204==Psc+ DT|20 Mar 1998 |10 Mar 1998 ABODURL|6e8.html 6E8 ASGN|FBgn0005624==Psc REFDSR { RDID|FBrf0058093 |Martin and Adler |1993 ABOD|mc, pc PCL|The FBgn0005624==Psc protein localizes to the nucleus. BODP|FBgn0005624==Psc protein is detected associated with condensed chromosomes in the | nuclei of the 16-nucleus embryo, and remains at high levels until | cellularization. The levels of FBgn0005624==Psc protein are low until late | embryogenesis, when intensestaining in the brain and ventral ganglia become | apparent. Pole cell nuclei also contain FBgn0005624==Psc protein from the time they | bud to their migration to the gonad during mid-embryogenesis. First instar | larval brain and ventral ganglion contain FBgn0005624==Psc protein, and third instar | larval imaginal discs express FBgn0005624==Psc protein. Larval polytene cell nuclei | stain for FBgn0005624==Psc protein. FBgn0005624==Psc protein binds to about 45 sites on salivary | gland polytene chromosomes, most of which are also binding sites for FBgn0003042==Pc | and polyhomeotic proteins. ASM|immunolocalization CVBODP|immunolocalization | E

| E pole cell

| E central nervous system

| L | first instar larval brain

| L | first instar larval ventral ganglion

| L | third instar imaginal disc

| L | third instar embryonic/larval salivary gland

CVCEL|nucleus } REF { REFM|FBrf0058093 |Martin and Adler |1993 } } # EOR PPR { RETE|ID 1 FBpp0001697 SYM 1 Ubx+P AAL 1 - PSZ 1 - HG 1 + DBA 1 - REF 1 13 DT 1 13 Apr 2000 RESZ 7273 ID|FBpp0001697 SYM|Ubx+P ASAL|FBal0068484==Ubx+ DT|13 Apr 2000 |10 Mar 1998 ASGN|FBgn0003944==Ubx REFDSR { RDID|FBrf0042035 |Struhl and White |1985 ASM|immunolocalization CVBODP| E | stage 15-16 ventral nervous system parasegment 5-13

} REFDSR { RDID|FBrf0048766 |Thali et al. |1988 HG|mammalian OTF-2 CC|FBgn0003944==Ubx protein binds to a heterologous homeotic binding site refered to as | Octa, which is a target for mammalian OTF-2. } REFDSR { RDID|FBrf0049619 |Tremml and Bienz |1989 BODP|FBgn0000095==Antp protein is first detected at germ band retraction stage in a 6-7 cell | width stripe in the midgut visceral mesoderm and the ectoderm of | parasegment 7. ASM|immunolocalization CVBODP| E | stage 13-14 visceral mesoderm embryonic/larval midgut } REFDSR { RDID|FBrf0049620 |Tremml and Bienz |1989 AGT|FBal0003885==eve3 |FBal0003886==eve4 |FBal0003774==en59 |FBal0003769==en54 |FBal0003770==en55 |FBal0018509==wgl-17 |FBal0013265==opa1 |FBal0005358==h41 |FBal0013225==odd5 |FBal0013967==prd4 |FBal0032617==runB102 |FBal0044874==KrB206 BODP|The UBX expression domain is twice as wide in homozygous FBgn0001077==ftz mutant | embryos as in wild type. Embryos homozygous for FBal0003885==eve[3] showed no UBX | staining but there is some staining in embryos homozygousfor FBal0003886==eve[4]. | Normal homeotic gene function is seen in embryos homozygous for FBal0003774==en[59], | FBal0003769==en[54], FBal0003770==en[55], FBal0018509==wg[l-17], FBal0013265==opa[1], FBal0005358==h[41], FBal0013225==odd[5], FBal0013967==prd[4] and | FBal0032617==run[B102]. No FBgn0003944==Ubx gene expression is seen in FBgn0001077==ftz,FBgn0003145==prd | double mutant embryos, some staining is seen in FBgn0003002==opa,FBgn0003145==prd | double mutant embryos and there is normal staining in FBgn0002985==odd |,FBgn0000606==eve double mutant embryos. The UBX domain is in the right | position in FBal0044874==Kr[B206] mutants, shifted posteriorly in FBgn0001320==kni mutants and | shifted anteriorly in FBgn0001180==hb mutants. ASM|immunolocalization CVBODP| E parasegment 7 visceral mesoderm

} REFDSR { RDID|FBrf0051363 |Immergluck et al. |1990 BODP|The posterior FBgn0000490==dpp stripe coincides with FBgn0003944==Ubx expression in parasegment 7. | FBgn0003944==Ubx expression is unaffected in FBal0003074==dpp[s4] embryos. CC|FBgn0000490==dpp expression is dependent on FBgn0003944==Ubx in parasegment 7 of the visceral mesoderm. } REFDSR { RDID|FBrf0051545 |Panganiban et al. |1990 BODP|Mutations in the shv region of FBgn0000490==dpp cause a range of effects on FBgn0003944==Ubx | expression. Generally, the FBgn0003944==Ubx expression domain is narrowed or the FBgn0003944==Ubx | protein level is reduced. FBgn0000014==abd-A mutationscause expansion of the domain of | FBgn0003944==Ubx expression in the visceral mesoderm to include the entire posterior midgut. ASM|immunolocalization } REFDSR { RDID|FBrf0051550 |Macias et al. |1990 BODP|In FBgn0000014==abd-A[-] embryos, FBgn0003944==Ubx protein levels are higher than in wild type | embryos in posterior compartments of metameres of the FBgn0000014==abd-A domain | suggesting that FBgn0000014==abd-A downregulates FBgn0003944==Ubx in these domains. CVBODP| E

} REFDSR { RDID|FBrf0055887 |Noordermeer et al. |1992 AGT|FBal0013024==nkd2 BODP|In wg[hs.P] embryos, after heat shock, FBgn0003944==Ubx protein is only seen in those | cells that do not express FBgn0000577==en. This is a similar expression pattern to | that found in FBgn0002945==nkd mutant embryos. ASM|immunolocalization } REFDSR { RDID|FBrf0056121 |Johnson and Krasnow |1992 CC|In vitro studies showed that FBgn0003944==Ubx and FBgn0000606==eve proteins exert active and | opposite effects on in vitro transcription when bound to a common site | upstream of a target (FBgn0000055==Adh) core promoter: UBX acts as an | activator and EVE acts as a repressor, and both affect the extent of | preinitiation complex formation. A subsequent step renders mature complexes | transiently refractory to activation and repression. } REFDSR { RDID|FBrf0058983 |Paro and Zink |1992 CC|Gel-shift analysis shows specific binding of FBgn0003944==Ubx protein to fragments from | the FBgn0003042==Pc gene region. } REFDSR { RDID|FBrf0059253 |Thuringer and Bienz |1993 AGT|FBal0036008==wghs.PN |FBal0031073==dpphs.PT BODP|Ubiquitously expressed FBgn0004009==wg leads to the anterior expansion of the domain of | FBgn0003944==Ubx expression in the visceral mesoderm to encompass parasegments 6 and | 7. Ubiquitous FBgn0000490==dpp has no effect on the domain of FBgn0003944==Ubx expression. ASM|immunolocalization } REFDSR { RDID|FBrf0063844 |Rowe and Akam |1988 ASTR|FBtr0005414==Ubx+R3.2 |FBtr0005415==Ubx+R4.3 } REFDSR { RDID|FBrf0076031 |Chan et al. |1994 CC|Utilizing a short probe from the FBgn0000490==dpp visceral mesoderm midgut enhancer | element, the authors showed through electromobility shift assays that both | FBgn0003944==Ubx and FBgn0000611==exd proteins bound FBgn0000490==dpp DNA. The binding of either of these | proteins is synergistically enhanced in the presence of the other. | Furhtermore, wildtype function of FBgn0003944==Ubx is required and sufficient to | activate FBgn0000490==dpp expression in the visceral mesoderm. } REF { REFM|FBrf0042035 |Struhl and White |1985 REFM|FBrf0048766 |Thali et al. |1988 REFM|FBrf0049619 |Tremml and Bienz |1989 REFM|FBrf0049620 |Tremml and Bienz |1989 REFM|FBrf0051363 |Immergluck et al. |1990 REFM|FBrf0051545 |Panganiban et al. |1990 REFM|FBrf0051550 |Macias et al. |1990 REFM|FBrf0055887 |Noordermeer et al. |1992 REFM|FBrf0056121 |Johnson and Krasnow |1992 REFM|FBrf0058983 |Paro and Zink |1992 REFM|FBrf0059253 |Thuringer and Bienz |1993 REFM|FBrf0063844 |Rowe and Akam |1988 REFM|FBrf0076031 |Chan et al. |1994 } } # EOR PPR { RETE|ID 1 FBpp0001725 SYM 1 mle+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 578 ID|FBpp0001725 SYM|mle+PA ASAL|FBal0070649==mle+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0002774==mle REFDSR { RDID|FBrf0068422 |Bone et al. |1994 ABOD|polyclonal PCL|FBgn0002774==mle protein binds to the same sites on the male X chromosome as FBgn0005617==msl-1 | protein. The pattern of binding of H4Ac16 along the X chromosome is largely | coincident with that of FBgn0002774==mle and FBgn0005617==msl-1. CVCEL|chromosome } REF { REFM|FBrf0068422 |Bone et al. |1994 } } # EOR PPR { RETE|ID 1 FBpp0001728 SYM 1 CycE+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 4 DT 1 20 Mar 1998 RESZ 3235 ID|FBpp0001728 SYM|CycE+P ASAL|FBal0066527==CycE+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0010382==CycE REFDSR { RDID|FBrf0068557 |Knoblich et al. |1994 CC|Coimmunoprecipitation experiments show that FBgn0010382==CycE protein specifically | associates with FBgn0004106==cdc2 kinase. } REFDSR { RDID|FBrf0082560 |Sauer et al. |1995 PCL|FBgn0010382==CycE protein is present throughout the early embryonic cycles. It is | predominantly nuclear during interphase and becomes dispersed in the | cytoplasm during mitosis. Two types of FBgn0010382==CycE protein are observed by | immunoblotting. Theform with the lower mobility is maximal during mitosis. | The higher mobility form is abundant in G[[2]] and is nearly absent during | M and early S phases. ASM|immunolocalization |western blot CC|FBgn0010382==CycE protein is the major partner of FBgn0004107==cdc2c protein. FBgn0010382==CycE and FBgn0004107==cdc2c | kinase activity are present throughout the cell cycle. } REFDSR { RDID|FBrf0084309 |Richardson et al. |1995 ABOD|mc,pc BODP|FBgn0010382==CycE protein is present in embryos in mitotically proliferating and | endoreplicating cells. In larval optic lobes, the pattern of FBgn0010382==CycE protein | expression is similar to the pattern of S phases. It is present in the | outer opticanlage, the inner optic anlage, and in a band corresponding to | the S phase lamina precursor cells. It is absent in G[[1]] phase lamina | precursor cells. It is also present in a region of the lamina where only a | portion of the cells are in S phase. In the eye imaginal disc, FBgn0010382==CycE | protein is present in a subset of the asynchronously proliferating cells | and in a band of cells just posterior to the morphogenetic furrow that are | in S phase but not in G[[1]] cells within and anterior to the furrow. In | summary, FBgn0010382==CycE protein is absent in G[[1]] phase cells but appears at the | onset of S phase in proliferating cells of the larval optic lobe and eye | imaginal disc. ASM|immunolocalization CVBODP|immunolocalization | L outer optic anlagen

| L inner optic anlagen

| L lamina anlagen

| L eye-antennal disc | restricted

| L morphogenetic furrow | posterior to

} REFDSR { RDID|FBrf0090669 |Lilly and Spradling |1996 BODP|FBgn0010382==CycE protein is expressed at varying levels (suggesting cycling) in both | nurse cells and follicle cells. Within individual egg chambers, nurse cell | nuclei with high, intermediate or low (to undetectable) levels of FBgn0010382==CycE | protein are observed. Levels are always high in the germinal vesicle and | increase as egg chambers develop. ASM|immunolocalization CVBODP|immunolocalization | O,A nurse cell

| O,A follicle cell

| O,A germinal vesicle

} REF { REFM|FBrf0068557 |Knoblich et al. |1994 REFM|FBrf0082560 |Sauer et al. |1995 REFM|FBrf0084309 |Richardson et al. |1995 REFM|FBrf0090669 |Lilly and Spradling |1996 } } # EOR PPR { RETE|ID 1 FBpp0001733 SYM 1 Csp+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 1080 ID|FBpp0001733 SYM|Csp+P ASAL|FBal0066519==Csp+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0004179==Csp REFDSR { RDID|FBrf0068753 |Zinsmaier et al. |1994 ABOD|monoclonal BODP|FBgn0004179==Csp protein is detected presynaptically at larval and adult neuromuscular | junctions. Synaptic boutons are strongly stained. In the CNS, Synapse rich | regions of the neuropil are stained, but the surrounding cell bodies are | not. One isoform is detected predominantly in photoreceptor terminals but | not at motor nerve terminals. FBgn0004179==Csp protein is thought to be associated | with synaptic vesicles. ASM|immunolocalization CVBODP|immunolocalization | L neuromuscular junction

| A neuromuscular junction adult thorax

| A bouton

| A neuropil

| A lamina neuropil

| A medulla neuropil

| A lobula plate neuropil

|A synaptic vesicle

| A photoreceptor cell

} REF { REFM|FBrf0068753 |Zinsmaier et al. |1994 } } # EOR PPR { RETE|ID 1 FBpp0001751 SYM 1 cact+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 4 DT 1 21 Nov 2000 RESZ 3844 ID|FBpp0001751 SYM|cact+P ASAL|FBal0068728==cact+ DT|21 Nov 2000 |10 Mar 1998 ASGN|FBgn0000250==cact REFDSR { RDID|FBrf0073424 |Isoda and Nusslein-Volhard |1994 CC|Disulfide crosslinking studies were used to show that FBgn0000462==dl and FBgn0000250==cact | proteins exist as three different complexes in the embyro. Complex 1 | (190kD) is a FBgn0000462==dl homodimer (dl[[2]]). Complex 2 (270kD) consists of a | complex 1 and a FBgn0000250==cact molecule (dl[[2]]cact). Complex 3 is a FBgn0000250==cact | protein complex. } REFDSR { RDID|FBrf0079887 |Belvin et al. |1995 CC|FBgn0000250==cact protein is rapidly degraded in response to the dorsal-ventral | signalling pathway. The degradation does not require the presence of FBgn0000462==dl | protein. More stable mutant forms of the protein block signalling. Protein | stability is regulated by two independent processes. Ankyrin repeats at the | amino-terminal end of the protein are required for signal-dependent | degradation while the carboxy-terminal end of the protein (which includes a | PEST sequence) is required for signal-independent degradation of free | FBgn0000250==cact protein. } REFDSR { RDID|FBrf0090754 |Reach et al. |1996 ABOD|polyclonal BODP|The level of FBgn0000250==cact protein in 0-3hr embyros of three genetic backgrounds | was studied. One is dorsalventral signal constitutive | (FBal0016833==Tl[8]), one wild type, and one signal deficient | (FBal0005010==gd[2]). FBgn0000250==cact levelsare lowest in the signal constitutive | mutant, intermediate in wild type, and highest in signal deficient embryos. | These differences are apparent as early as stage 2. Furthermore, FBgn0000250==cact | protein is present in a dorsoventral gradient. High levels of protein are | present in the dorsal cytoplasm where no intracellular signal transduction | occurs and little protein is found in the ventral cytoplasm where | signalling is strongest. In FBal0016833==Tl[8] and FBal0005010==gd[2] embryos, FBgn0000250==cact protein | levels are uniformly low or high respectively. ASM|immunolocalization CVBODP|immunolocalization | E | early

dorsal ventral gradient CC|FBgn0000250==cact regulation was reconstituted in SL2 cells. Immunoblot and | immunoprecipitation experiments indicate that FBgn0010441==pll protein induces the | spatially graded degradation of FBgn0000250==cact protein. This response is dependent | on the presence of a motif in FBgn0000250==cact protein which resembles sites of | signal-dependent phosphorylation in vertebrate homologs. Substitution of | the four serines in this motif at positions 74, 78, 82, and 83 with | nonphosphorylatable alanine results in a form of FBgn0000250==cact protein that is | resistant to FBgn0010441==pll-protein-induced degradation. Mutation of individual | sites indicates that no single site is absolutely required and that all | sites are not equal. Mutation of the four potential phosphorylation sites | renders FBgn0000250==cact resistant to signal-dependent degredation in embryos as well. } REFDSR { RDID|FBrf0125338 |Bhaskar et al. |2000 CC|FBgn0010602==lwr protein releives the inhibition of FBgn0000462==dl protein nuclear uptake by | FBgn0000250==cact protein in cultured cells. } REF { REFM|FBrf0073424 |Isoda and Nusslein-Volhard |1994 REFM|FBrf0079887 |Belvin et al. |1995 REFM|FBrf0090754 |Reach et al. |1996 REFM|FBrf0125338 |Bhaskar et al. |2000 } } # EOR PPR { RETE|ID 1 FBpp0001770 SYM 1 trx+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 1848 ID|FBpp0001770 SYM|trx+P ASAL|FBal0071404==trx+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003862==trx REFDSR { RDID|FBrf0076508 |Kuzin et al. |1994 PCL|FBgn0003862==trx protein strongly binds to 16 specific sites along the polytene | chromosomes. Among these is the FBgn0000659==fkh gene region. BODP|FBgn0003862==trx protein is present at high levels in the embryonic CNS. It is also | observed in a variety of tissues in larvae including imaginal discs, | salivary glands, and gut tissues. Staining is weak in the brain and ventral | ganglia. FBgn0003862==trx protein is expressed in most nuclei in the eye-antennal disc | but is expressed predominantly in the posterior regions of the wing, | haltere, and mesothoracic leg discs. ASM|immunolocalization CVBODP|immunolocalization | L | third instar dorsal mesothoracic disc | posterior

| L | third instar dorsal metathoracic disc | posterior

| L | third instar eye-antennal disc

| L | third instar ventral mesothoracic disc | posterior

| L | third instar imaginal disc

| L | third instar embryonic/larval digestive system

| L | third instar Malpighian tubule

| L | third instar gastric caecum

| L | third instar embryonic/larval midgut

| L | third instar embryonic/larval proventriculus

| L | third instar embryonic/larval salivary gland

CVCEL|nucleus |polytene chromosome CC|FBgn0003862==trx gene product binds within an 8.4kb regulatory region of the FBgn0000659==fkh gene | that directs embryonic expression. It also binds to ectopic sites carrying | these sequences in transformed lines. } REF { REFM|FBrf0076508 |Kuzin et al. |1994 } } # EOR PPR { RETE|ID 1 FBpp0001771 SYM 1 Pu+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 787 ID|FBpp0001771 SYM|Pu+P ASAL|FBal0068211==Pu+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003162==Pu REFDSR { RDID|FBrf0076754 |Chen et al. |1994 ABOD|polyclonal BODP|The FBgn0003162==Pu protein is detected in the nurse cell cytoplasm in stage S10B of | oogenesis, and has been transferred to granules in the oocyte cytoplasm at | stage S14 of oogenesis. The level of FBgn0003162==Pu protein is high in the | unfertilized egg, declines through early embryogenesis, and is not detected | after cellularization. ASM|immunolocalization CVBODP|il E | early yolk granule

CC|The FBgn0003162==Pu antibody detects a 52 kD protein in 0-2 hr embryos. } REF { REFM|FBrf0076754 |Chen et al. |1994 } } # EOR PPR { RETE|ID 1 FBpp0001777 SYM 1 &agr;-Spec+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 573 ID|FBpp0001777 SYM|&agr;-Spec+PA ASAL|FBal0066293==&agr;-Spec+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003470==&agr;-Spec REFDSR { RDID|FBrf0077251 |Viel and Branton |1994 CC|The regions of the tail ends of the &agr;-Spec and &bgr;-Spec@ chains that | are necessary for interchain binding were mapped in vitro. Segments 20 and | 21 and part of 22 of the &agr; chain and segments 2 and 3 and part of 1 of | the &bgr; chain are required for interchain binding. } REF { REFM|FBrf0077251 |Viel and Branton |1994 } } # EOR PPR { RETE|ID 1 FBpp0001786 SYM 1 tkv+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 2 DT 1 20 Mar 1998 RESZ 554 ID|FBpp0001786 SYM|tkv+P ASAL|FBal0071387==tkv+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003716==tkv REFDSR { RDID|FBrf0080209 |Letsou et al. |1995 CC|FBgn0003169==put protein binds BMP2 in concert with FBgn0003716==tkv, forming heteromeric receptor | complexes in COS1 cell transient assays. } REFDSR { RDID|FBrf0104902 |Haerry et al. |1998 ASTR|FBtr0000825==tkv+R } REF { REFM|FBrf0080209 |Letsou et al. |1995 REFM|FBrf0104902 |Haerry et al. |1998 } } # EOR PPR { RETE|ID 1 FBpp0001787 SYM 1 ovo+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 2457 ID|FBpp0001787 SYM|ovo+P ASAL|FBal0070857==ovo+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003028==ovo REFDSR { RDID|FBrf0080251 |Mevel-Ninio et al. |1995 PCL|The FBgn0003028==ovo protein is detected in germ cell nuclei, and may be associated | with chromatin. BODP|An FBgn0003028==ovo-lacZ fusion protein (hereafter referred to as FBgn0003028==ovo | protein) is detected in female germ cell nuclei early in oogenesis. The | protein accumulates in nurse cell nuclei until stage 10, after which time | it is seen in the oocyte nucleus. During embryogenesis, the FBgn0003028==ovo protein | is at first expressed at high levels throughout the embryo, and this | general expression, decreases greatly by stage 8, when the specific | expression of FBgn0003028==ovo protein in pole cell nuclei becomes apparent. FBgn0003028==ovo | protein expression persists in pole cell nuclei through embryonic | development, and continues until the incorporation of the pole cells into | the developing gonads at stage 14. From this stage onwards, FBgn0003028==ovo protein | is detected in the developing gonads, and at stage 17, FBgn0003028==ovo protein | staining is seen in the nuclei of the germ cells in the gonads. The FBgn0003028==ovo | protein is detected in the nuclei of germ cells in female first instar | larvae, but its expression becomes limited to a subpopulation of these | cells in female second and third instar larvae. In male second and third | instar larvae, FBgn0003028==ovo protein staining is seen in the anterior of the gonad, | and in the adult male, staining is seen at the tip of the testis, in the | nuclei of presumptive stem cells and cysts. CVBODP| O,A female germline stem cell

| O,A | stage 8 nurse cell

| O,A | stage 10 oocyte

| E | blastoderm

ubiquitous | E | stage 8-14 pole cell

| E | stage 17 germ cell | nucleus

| O,L | first instar female germline stem cell

| L | first instar gonad

| O,L | second instar female germline stem cell | restricted

| O,L | third instar female germline stem cell | restricted

| A,S male germline stem cell

CVCEL|nucleus } REF { REFM|FBrf0080251 |Mevel-Ninio et al. |1995 } } # EOR PPR { RETE|ID 1 FBpp0001793 SYM 1 mnb+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 988 ID|FBpp0001793 SYM|mnb+P ASAL|FBal0070653==mnb+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0002777==mnb REFDSR { RDID|FBrf0080444 |Tejedor et al. |1995 BODP|FBgn0002777==mnb protein is most prominent in the mushroom body neuropil and the outer | proliferation centers of the optic lobes in the larval brain. In adult | brains, the level of FBgn0002777==mnb protein is low in the optic lobes and central | brain hemispheres but is high in retinal pigment cells as well as in the | &agr;, &bgr;, and &ggr; cells and the peduncle of the mushroom bodies. ASM|immunolocalization CVBODP|immunolocalization | L corpora pedunculata

| L outer optic anlagen

| L larval optic lobe

| A &agr;-lobe

| A &bgr;-lobe

| A &ggr;-lobe

| A corpora pedunculata

| A retina

| A pigment cell

} REF { REFM|FBrf0080444 |Tejedor et al. |1995 } } # EOR PPR { RETE|ID 1 FBpp0001812 SYM 1 sr+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 187 ID|FBpp0001812 SYM|sr+P ASAL|FBal0071143==sr+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003499==sr REF { REFM|FBrf0084118 |Lee et al. |1995 } } # EOR PPR { RETE|ID 1 FBpp0001825 SYM 1 psq+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 1017 ID|FBpp0001825 SYM|psq+P ASAL|FBal0070921==psq+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0004399==psq REFDSR { RDID|FBrf0086124 |Weber et al. |1995 ABOD|polyclonal PCL|FBgn0004399==psq protein localizes to the nucleus. BODP|In the eye-antennal disc FBgn0004399==psq protein localizes to ommatidial precluster | cells, with highest levels in R3 and R4. In the larval wing disc, in | addition to the overall low expression, there is a region of high FBgn0004399==psq | protein expression in the wing blade primordium. CVBODP| L eye-antennal disc | restricted

| L dorsal mesothoracic disc

CVCEL|nucleus CC|The BTB-domain is predicted for the products of the class A transcripts | (FBtr0001424==psq[+]R7.0A1 and FBtr0001425==psq[+]R7.0A2) only, FBpp0001060==psq[+]P1085 and | FBpp0001061==psq[+]P535. } REF { REFM|FBrf0086124 |Weber et al. |1995 } } # EOR PPR { RETE|ID 1 FBpp0001876 SYM 1 fru+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 771 ID|FBpp0001876 SYM|fru+P ASAL|FBal0068967==fru+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0004652==fru REFDSR { RDID|FBrf0091159 |Ryner et al. |1996 CC|Multiple FBgn0004652==fru proteins are produced from alternatively spliced FBgn0004652==fru | transcripts. A female-specific form of FBgn0004652==fru protein lacks 101 N-terminal | amino acids present in a male-specific FBgn0004652==fru protein. Differences are also | found in the zinc finger pairs present at the carboxy terminus. In related | proteins, these zinc finger pairs confer distinct DNA-binding specificity | and are expressed in cell-specific patterns. } REF { REFM|FBrf0091159 |Ryner et al. |1996 } } # EOR PPR { RETE|ID 1 FBpp0001942 SYM 1 DNA-ligI+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 2 DT 1 20 Mar 1998 RESZ 1220 ID|FBpp0001942 SYM|DNA-ligI+PA ASAL|FBal0066545==DNA-ligI+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0013774==DNA-ligI REFDSR { RDID|FBrf0046241 |Takahashi and Senshu |1987 PCL|DNA-LIGI is found in the cytoplasmic fraction of embryonic extracts. BODP|Activity was high in 0-4hr embryos, lower in 8hr embryos and undetectable in | 16hr embryos. ASM|enzyme assay or biochemical detection CVBODP| E | early-mid

CVCEL|cytoplasm CC|The properties of two DNA ligases purified from embryos were compared. The | enzymes differ in size, thermostability, affinity for ATP, Km, and optimal | reaction conditions (salt optima, requirement for DTT, and reaction to | PVA). They are similar in requirement for ATP as cofactor and Mg[2+] as | divalent cation, inhibition by N-ethylmaleimide, optimal ligation temp, and | substrate specificity. The AMP-adducts have molecular weights of 86kD and 75kD. } REFDSR { RDID|FBrf0046586 |Rabin and Chase |1987 CC|The substrate specificity and mechanism of action of DNA-lig are described. | The joining reactions is shown to be reversible. } REF { REFM|FBrf0046241 |Takahashi and Senshu |1987 REFM|FBrf0046586 |Rabin and Chase |1987 } } # EOR PPR { RETE|ID 1 FBpp0001943 SYM 1 DNA-ligII+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 889 ID|FBpp0001943 SYM|DNA-ligII+PA ASAL|FBal0066546==DNA-ligII+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0013775==DNA-ligII REFDSR { RDID|FBrf0046241 |Takahashi and Senshu |1987 PCL|DNA-ligII is concentrated in the nucleus. BODP|Activity was detected throughout embryogenesis. ASM|enzyme assay or biochemical detection CVCEL|nucleus CC|The properties of two DNA ligases purified from embryos were compared. The | enzymes differ in size, thermostability, affinity for ATP, Km, and optimal | reaction conditions (salt optima, requirement for DTT, and reaction to | PVA). They are similar in requirement for ATP as cofactor and Mg[2+] as | divalent cation, inhibition by N-ethylmaleimide, optimal ligation temp, and | substrate specificity. The major AMP-adduct has a molecular weight of 70kD. } REF { REFM|FBrf0046241 |Takahashi and Senshu |1987 } } # EOR PPR { RETE|ID 1 FBpp0001951 SYM 1 Sxl+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 3 DT 1 22 Aug 2000 RESZ 1429 ID|FBpp0001951 SYM|Sxl+P ASAL|FBal0068426==Sxl+ DT|22 Aug 2000 |10 Mar 1998 ABODURL|m114.html M114 |m182a.html M18 ASGN|FBgn0003659==Sxl REFDSR { RDID|FBrf0051358 |Parkhurst et al. |1990 BODP|FBgn0003659==Sxl is normally expressed uniformly in female embryos starting from early | blastoderm stages and is not expressed in male embryos. In h[hb.P] | embryos, the ectopic FBgn0001168==h protein suppresses FBgn0003659==Sxl in the anterior of the | embryo resulting in its expression only at the posterior end in female | embryos. In sc[hb.P] embryos, ectopic FBgn0004170==sc protein causes ectopic FBgn0003659==Sxl | expression in the anterior end of male embryos. ASM|immunolocalization CVBODP| E | female

0-100% egg length } REFDSR { RDID|FBrf0055582 |Younger-Shepherd et al. |1992 CC|FBgn0003659==Sxl expression is derepressed in FBgn0010109==dpn null male embryos while the female | embryo expression pattern is unchanged. FBgn0003659==Sxl was also misexpressed in | embryos with altered dosage of the FBgn0010109==dpn and FBgn0004170==sc genes. } REF { REFM|FBrf0051358 |Parkhurst et al. |1990 REFM|FBrf0055582 |Younger-Shepherd et al. |1992 REFM|FBrf0111851 |Dong and Bell |1999 } } # EOR PPR { RETE|ID 1 FBpp0001956 SYM 1 Ddc+P AAL 1 - PSZ 1 56 HG 1 - DBA 1 - REF 1 7 DT 1 22 Aug 2000 RESZ 3604 ID|FBpp0001956 SYM|Ddc+P ASAL|FBal0066711==Ddc+ DT|22 Aug 2000 |10 Mar 1998 ASGN|FBgn0000422==Ddc REFDSR { RDID|FBrf0037051 |Hirsh and Davidson |1981 PSZ|60 | observed BODP|FBgn0000422==Ddc protein enzymatic activity levels rise during late larval stages, are | highest during the pre-pupal stage of development, and rise again prior to | ecolsion after a decrease in activity. ASM|enzyme assay or biochemical detection CVBODP|enzyme assay or biochemical detection | L | third instar-A

ASTR|FBtr0001949==Ddc+R2.1 } REFDSR { RDID|FBrf0042353 |Gietz and Hodgetts |1985 BODP|FBgn0000422==Ddc activity reaches a maximum late in embryogenesis and persists into | first instar larvae. It does not parallel ecdysone activity which is at a | maximum at midembryogenesis. } REFDSR { RDID|FBrf0046010 |Konrad and Marsh |1987 PSZ|56 | observed ABOD|polyclonal BODP|Immunolocalization experiments using an anti-FBgn0000422==Ddc antibody | indicate that FBgn0000422==Ddc protein is expressed in the epidermis and the nervous | system of the third instar larva and adult. A segmentally repeated pattern | of staining is seenin the larval ventral ganglion and brain. A subset of | the FBgn0000422==Ddc-positive cells match the pattern of serotonin-containing cells. | The staining in the adult hindgut and oviduct is likely to be due neurons | associated with these structures. ASM|immunolocalization CVBODP|immunolocalization | L ring gland

| L | third instar stage 2 epidermis

| L | third instar larval brain | restricted

| L | third instar larval stomatogastric nervous system

| L | third instar frontal ganglion

| L | third instar recurrent nerve

| L | third instar larval ventricular ganglion

| L | third instar larval ventral ganglion

| L | third instar larval maxillary nerve

| A thoracic ganglion | restricted

| A adult brain | restricted

| A adult hindgut

| A | female oviduct

} REFDSR { RDID|FBrf0046284 |Beall and Hirsh |1987 ABOD|polyclonal BODP|In third instar larvae, FBgn0000422==Ddc protein localizes to approximately 125 | neurons, and a subset of glial cells. About 80 of the 125 neurons also | stain for serotonin. ASM|immunolocalization CVBODP|immunolocalization | L | third instar larval central nervous system

| L | third instar neuron | subset

| L | third instar glial cell | subset

} REFDSR { RDID|FBrf0053728 |Walter et al. |1991 BODP|FBgn0000422==Ddc activity was investigated in whole imagos and in developing wings. In | the whole imago, activity increases steadily between 64 hours after | pupariation and eclosion. In wings, there is a peak of activity at 76 hrs | which correlates with the time when the wing microchaetae and hairs have | become fully melanized. ASM|enzyme assay or biochemical detection } REFDSR { RDID|FBrf0082387 |Mukhopadhyay and Campos |1995 ASM|immunolocalization CVBODP|immunolocalization | L | third instar larval brain | restricted

| L | third instar LP1 neuron

} REF { REFM|FBrf0037051 |Hirsh and Davidson |1981 REFM|FBrf0042353 |Gietz and Hodgetts |1985 REFM|FBrf0046010 |Konrad and Marsh |1987 REFM|FBrf0046284 |Beall and Hirsh |1987 REFM|FBrf0053728 |Walter et al. |1991 REFM|FBrf0082387 |Mukhopadhyay and Campos |1995 REFM|FBrf0108469 |Tatarenkov et al. |1999 } } # EOR PPR { RETE|ID 1 FBpp0001974 SYM 1 Gal+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 453 ID|FBpp0001974 SYM|Gal+PA ASAL|FBal0067828==Gal+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0001089==Gal REFDSR { RDID|FBrf0054708 |Knipple et al. |1991 BODP|GAL activity was detected in pupal and adult stages but not in larvae. ASM|enzyme assay or biochemical detection CVBODP| P

| A

ASTR|FBtr0002010==Gal+R2.3 } REF { REFM|FBrf0054708 |Knipple et al. |1991 } } # EOR PPR { RETE|ID 1 FBpp0002004 SYM 1 qrt+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 394 ID|FBpp0002004 SYM|qrt+PA ASAL|FBal0070940==qrt+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003185==qrt REFDSR { RDID|FBrf0047839 |Cheney and Lang |1988 CC|The FBgn0003185==qrt protein is thought to encode a protein modifying enzyme since | mutants show protein modification defects. } REF { REFM|FBrf0047839 |Cheney and Lang |1988 } } # EOR PPR { RETE|ID 1 FBpp0002027 SYM 1 sli+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 3 DT 1 6 Jan 2000 RESZ 1415 ID|FBpp0002027 SYM|sli+P ASAL|FBal0071062==sli+ DT|6 Jan 2000 |10 Mar 1998 ABODURL|c555.6d.html C555.6D ASGN|FBgn0003425==sli REFDSR { RDID|FBrf0047629 |Rothberg et al. |1988 ABOD|polyclonal BODP|FBgn0003425==sli protein is first detected in the midline neurepithelium after germ | band extension. During germ band shortening, expression becomes restricted | to median ectodermal cells (MECs). After germ band contraction is complete, | FBgn0003425==sliprotein is detected in MECs, the axon commissures they surround, and | longitudinal connectives. In supraesophageal segments, strong axon | labelling is detected, and this labelling seems to be on the cell surface. ASM|immunolocalization CVBODP|immunolocalization | E | extended germ band stage ventral midline

| E | contracted germ band stage longitudinal connectives | restricted

| E | contracted germ band stage axon embryonic central nervous system

CVCEL|plasma membrane } REFDSR { RDID|FBrf0107628 |Brose et al. |1999 CC|Like its mammalian counterparts, the full-length FBgn0003425==sli protein may be | proteolytically processed to give a 55-60 kD C-terminal fragment and a 140 | kD N-terminal fragment. } REF { REFM|FBrf0047629 |Rothberg et al. |1988 REFM|FBrf0056064 |Patthy |1992 REFM|FBrf0107628 |Brose et al. |1999 } } # EOR PPR { RETE|ID 1 FBpp0002029 SYM 1 nonA+P AAL 1 - PSZ 1 80 HG 1 - DBA 1 - REF 1 2 DT 1 12 Feb 2001 RESZ 944 ID|FBpp0002029 SYM|nonA+P ASAL|FBal0070828==nonA+ DT|12 Feb 2001 |10 Mar 1998 ASGN|FBgn0004227==nonA REFDSR { RDID|FBrf0056578 |Rendahl et al. |1992 PSZ|80 ABOD|polyclonal PCL|NONA@ is nuclear except in early embryos prior to cellular blastoderm stage | where it is cytoplasmic. BODP|FBgn0004227==nonA protein is distributed ubiquitously in oocytes, embryos, larvae, | pupae, and adults. ASM|immunolocalization CVBODP| O,A oocyte | ubiquitous

| E

ubiquitous | L

ubiquitous | P

ubiquitous | A

ubiquitous CVCEL|nucleus CC|The RNA-binding motif of FBgn0004227==nonA protein is most similar to those of FBgn0003659==Sxl | protein, the polyA-binding proteins, and FBgn0003742==tra2 protein. } REF { REFM|FBrf0056578 |Rendahl et al. |1992 REFM|FBrf0126775 |Hovemann et al. |2000 } } # EOR PPR { RETE|ID 1 FBpp0002038 SYM 1 Dip-A+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 812 ID|FBpp0002038 SYM|Dip-A+PA SYN|Dip A ASAL|FBal0066899==Dip-A+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0000453==Dip-A REFDSR { RDID|FBrf0000000Flybase Curation BODP|FBgn0000453==Dip-A specific activity is highest in embryos and young larvae and is | present at fairly uniform levels thereafter. FBgn0000453==Dip-A specific activity was | found to be fairly uniform in all tissues studied except in gut and | Malphigian tubules where it is higher than average and adult thorax where | it is low. CVBODP| L embryonic/larval digestive system

| L Malpighian tubule

| A pupal/adult digestive system

| A Malpighian tubule

| O,A | female ovary

} REF { REFM|FBrf0000000Flybase Curation } } # EOR PPR { RETE|ID 1 FBpp0002040 SYM 1 Lap-D+PB AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 5 Nov 1999 RESZ 1002 ID|FBpp0002040 SYM|Lap-D+PB SYN|LapP+PA ASAL|FBal0067982==Lap-D+ DT|5 Nov 1999 |10 Mar 1998 ASGN|FBgn0002530==Lap-D REFDSR { RDID|FBrf0000000Flybase Curation ASM|enzyme assay or biochemical detection PCL|The LapP protein in early embryos is present in an insoluble form and is | thought to be membrane or vesicle associated. BODP|The level of LapP protein in embryos does not change significantly but a | change from an insoluble to a soluble form occurs. It's likely location in | early embryos is in the yolk. The rise in LapP activity that occurs just | before pupariation is dependent on ecdysone. CVBODP| O,A | female ovary

| P puparium

| P exuvial fluid

CC|No specific assays are available for "LapG" activity. Estimates of LapG | activity are therefore based on the total Lap activity less the "LapP" contribution. } REF { REFM|FBrf0000000Flybase Curation } } # EOR PPR { RETE|ID 1 FBpp0002041 SYM 1 Lap-D+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 5 Nov 1999 RESZ 939 ID|FBpp0002041 SYM|Lap-D+PA SYN|LapG+PA ASAL|FBal0067982==Lap-D+ DT|5 Nov 1999 |10 Mar 1998 ASGN|FBgn0002530==Lap-D REFDSR { RDID|FBrf0000000Flybase Curation BODP|Activity is highest in larvae and adults. It is found mainly in the gut but | is also found in the Malpighian tubules. |LapG activity is low in early embryos and rises from 15 hours through | hatching. A rise in LapG activity after eclosion appears to be dependent | upon ingestion of dietary protein. CVBODP| L embryonic/larval digestive system

| L Malpighian tubule

| A pupal/adult digestive system

| A Malpighian tubule

CC|No specific assays are available for "LapG" activity. Estimates of LapG | activity are therefore based on the total Lap activity less the "LapP" contribution. } REF { REFM|FBrf0000000Flybase Curation } } # EOR PPR { RETE|ID 1 FBpp0002058 SYM 1 bcd+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 6 DT 1 22 Aug 2000 RESZ 1918 ID|FBpp0002058 SYM|bcd+P ASAL|FBal0068679==bcd+ DT|22 Aug 2000 |10 Mar 1998 ASGN|FBgn0000166==bcd REFDSR { RDID|FBrf0055557 |Gavis and Lehmann |1992 AGT|FBal0035302==nosbcd.3UTR BODP|FBgn0000166==bcd protein is not detected in FBal0035302==nos[bcd.3UTR] embryos. ASM|immunolocalization } REFDSR { RDID|FBrf0086609 |Sauer et al. |1995 CC|In vitro constructs containing FBgn0000166==bcd sequences were attributed with wild | type FBgn0000166==bcd function. Affinity chromatography and gel shift assays were | used to demonstrate that two separate activation domains of FBgn0000166==bcd protein | interact with components of the TFIID complex. Specifically, the | glutamine rich domian interacts with Taf110, and the alanine rich domain | interacts with Taf60. Transcription activation assays demonstrate that | these two domains act in synergism. } REFDSR { RDID|FBrf0105200 |Burz et al. |1998 CC|FBgn0000166==bcd protein is expressed in yeast under the control of &bgr;estradiol in | order to control the amount of FBgn0000166==bcd protein produced. Cooperative binding | to FBgn0000166==bcd response regions on various lacZ reporter constructs was studied | with transcription assays, in vitro gel shift assays and foot print | analysis. The FBgn0000166==bcd responsive region of FBgn0001320==kni was used both in vitro and | in vivo to ascertain the strength of FBgn0000166==bcd binding sites. } REF { REFM|FBrf0043921 |Frigerio et al. |1986 REFM|FBrf0051645 |Seeger and Kaufman |1990 REFM|FBrf0055557 |Gavis and Lehmann |1992 REFM|FBrf0086609 |Sauer et al. |1995 REFM|FBrf0105200 |Burz et al. |1998 REFM|FBrf0126798 |Zhu and Hanes |2000 } } # EOR PPR { RETE|ID 1 FBpp0002072 SYM 1 Ars+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 557 ID|FBpp0002072 SYM|Ars+PA ASAL|FBal0066403==Ars+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0000122==Ars REFDSR { RDID|FBrf0045645 |Pelliccia et al. |1987 BODP|The peak of FBgn0000122==Ars enzyme activity coincides with the time of hatching from | embryo to larva. ASM|enzyme assay or biochemical detection CC|Two independently regulated aryl sulfatase activities are shown to be | present in Drosophila and are referred to as Type I and Type II. } REF { REFM|FBrf0045645 |Pelliccia et al. |1987 } } # EOR PPR { RETE|ID 1 FBpp0002199 SYM 1 Me+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 727 ID|FBpp0002199 SYM|Me+PA ASAL|FBal0068058==Me+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0002704==Me REFDSR { RDID|FBrf0057573 |Li |1992 CC|The quantities of six out of seven enzymes tested were higher in FBal0000314==Adh[F] | homozygotes than in FBal0000321==Adh[S] homozygotes. Levels were significantly higher | at the 0.001 level for FBgn0000055==Adh, FBgn0001091==Gapdh1, and FBgn0003076==Pgm and higher at the 0.05 | level for FBgn0001128==Gpdh. FBgn0001248==Idh levels were not increased in FBal0000314==Adh[F] flies. } REF { REFM|FBrf0057573 |Li |1992 } } # EOR PPR { RETE|ID 1 FBpp0002213 SYM 1 shi+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 579 ID|FBpp0002213 SYM|shi+PA ASAL|FBal0071044==shi+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003392==shi REFDSR { RDID|FBrf0056470 |Chen et al. |1992 ABOD|polyclonal ASTR|FBtr0000493==shi+R5.1 |FBtr0000494==shi+R4.3 CC|A form of FBgn0003392==shi protein which localizes predominantly to the head. This form | includes 6aa inserted at the first alternate splice site (Alt1) that are | absent in the "body" form of the protein. } REF { REFM|FBrf0056470 |Chen et al. |1992 } } # EOR PPR { RETE|ID 1 FBpp0002214 SYM 1 shi+PB AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 880 ID|FBpp0002214 SYM|shi+PB ASAL|FBal0071044==shi+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003392==shi REFDSR { RDID|FBrf0056470 |Chen et al. |1992 ABOD|polyclonal ASTR|FBtr0000495==shi+R3.6 CC|A form of FBgn0003392==shi protein which localizes predominantly to the body. This form | lacks 6aa inserted at the first alternate splice site (Alt1) that are | present in the "head" form of the protein. An antibody to FBgn0003392==shi was | generated in mouse that reacts primarily with the body form of FBgn0003392==shi | protein. This difference supports the existence of different brain and body | forms but the differential immunoreactivity could not be completely | explained by the splicing variants identified here. } REF { REFM|FBrf0056470 |Chen et al. |1992 } } # EOR PPR { RETE|ID 1 FBpp0002216 SYM 1 Ssb+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 2359 ID|FBpp0002216 SYM|Ssb+PA ASAL|FBal0068340==Ssb+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0010085==Ssb REFDSR { RDID|FBrf0056550 |Budnik and Gorczyca |1992 AGT|FBal0015610==shi1 PCL|Electron microscopical analysis shows that FBgn0010085==Ssb protein is concentrated at | the presynaptic terminal in close proximity to synaptic vesicles and in the | postsynaptic subsynaptic reticulum. It is nuclear in testis and ovary. BODP|FBgn0010085==Ssb protein localizes to a specific subset of neuromuscular junction | terminals in the larval body wall. Expression is exclusive to the synaptic | boutons of type II terminals and is seen from 18hr of embryonic development | through to 8hr afterpuparium formation. Expression is also seen in a small | segmentally repeated set of neurons in the larval ventral ganglion and in a | number of cell clusters and in the neuropil in the brain. Larval testis and | ovary cells are also stained. ASM|immunolocalization CVBODP| L somatic muscle

| L synapse

| L central nervous system

| L neuropil

| L larval brain | restricted

| L larval ventral ganglion

| L,S testis

| O,L ovary

| L abdominal2..7 dorsal acute muscle 1

| L abdominal 2..7 dorsal acute muscle 2

| L abdominal 2..7 dorsal acute muscle 3

| L abdominal 2..7 segment border muscle

| L abdominal 2..7 dorsal oblique muscle 1

| L abdominal 2..7 dorsal oblique muscle 2

| L abdominal 2..7 ventral longitudinal muscle 1

| L abdominal 2..7 ventral longitudinal muscle 2

| L abdominal 2..7 ventral oblique muscle 1

| L abdominal 2..7 ventral oblique muscle 2

| L abdominal 2..7 ventral oblique muscle 4

| L abdominal 2..7 ventral oblique muscle 5

| L abdominal 2..7 ventral oblique muscle 6

| L abdominal 2..7 lateral transverse muscle 2

| L abdominal 2..7 ventral acute muscle 1

| L abdominal 2..7 ventral acute muscle 2

| L abdominal 2..7 ventral acute muscle 3

CVCEL|nucleus |synapse CC|Ultrastructural studies done by electron microscopy. } REF { REFM|FBrf0056550 |Budnik and Gorczyca |1992 } } # EOR PPR { RETE|ID 1 FBpp0002220 SYM 1 fz+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 211 ID|FBpp0002220 SYM|fz+P ASAL|FBal0069190==fz+ DT|20 Mar 1998 |10 Mar 1998 ABODURL|1c11.html 1C11 ASGN|FBgn0001085==fz REF { REFM|FBrf0056423 |Chan et al. |1992 } } # EOR PPR { RETE|ID 1 FBpp0002231 SYM 1 tra+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 20 Mar 1998 RESZ 654 ID|FBpp0002231 SYM|tra+P ASAL|FBal0071393==tra+ DT|20 Mar 1998 |10 Mar 1998 ASGN|FBgn0003741==tra REFDSR { RDID|FBrf0057906 |Tian and Maniatis |1993 CC|FBgn0003741==tra and FBgn0003742==tra2 proteins as well as a set of SR proteins isolated from HeLa | cells were shown to be necessary for the formation of a complex which | commits the FBgn0000504==dsx pre-mRNA to the female-specific splicing pathway. The | factors bind to a regulatory element located downstream of the 3' | female-specific splice site. } REF { REFM|FBrf0057906 |Tian and Maniatis |1993 } } # EOR PPR { RETE|ID 1 FBpp0002232 SYM 1 Abd-B+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 6 DT 1 5 Jan 2000 RESZ 2421 ID|FBpp0002232 SYM|Abd-B+P ASAL|FBal0066331==Abd-B+ DT|5 Jan 2000 |10 Mar 1998 ASGN|FBgn0000015==Abd-B REFDSR { RDID|FBrf0049619 |Tremml and Bienz |1989 BODP|FBgn0000015==Abd-B protein is first detected at germ band retraction stage in the | midgut and hindgut visceral mesoderm and the ectoderm of parasegments 11-15. ASM|immunolocalization CVBODP| E | stage 13-14 visceral mesoderm embryonic/larval midgut | E | stage 13-14 visceral mesoderm embryonic/larval hindgut } REFDSR { RDID|FBrf0051569 |de Lorenzi and Bienz |1990 ABOD|polyclonal BODP|The FBgn0000015==Abd-B protein is first detected in stage 10 embryos in the anterior | region of parasegment 15, parasegment 14 and the posterior region of | parasegment 13. By stage 11, the anterior boundary of FBgn0000015==Abd-B expression is | expanded into parasegment 11, and expression is detected mainly in the | visceral mesoderm of parasegments 11-13. By stage 13 of embryogenesis, the | anterior boarder of expression is extended into parasegment 10 of the ectoderm. ASM|immunolocalization CVBODP| E | stage 10 parasegment 13-15

| E | stage 11-13 parasegment 11-15

| E | stage 11 visceral mesoderm parasegment 11-14

| E | stage 13 ectoderm parasegment 10-13

CVCEL|nucleus CC|The antibody reported in this paper recognizes both the Abd-B-m and Abd-B-r proteins. } REFDSR { RDID|FBrf0068620 |Orlando and Paro |1993 BODP|FBgn0000015==Abd-B protein is expressed in SL-2 cells. ASM|western blot |immunolocalization } REFDSR { RDID|FBrf0072541 |Bachiller et al. |1994 ASM|immunolocalization CVBODP| E | stage 12 parasegment 11-14

} REFDSR { RDID|FBrf0080088 |Hendrickson and Sakonju |1995 ASM|immunolocalization CVBODP| E | stage 12 parasegment 10-14

} REFDSR { RDID|FBrf0088118 |Freeland and Kuhn |1996 ASM|immunolocalization CVBODP|immunolocalization | L | third instar female genital disc | restricted

| L | third instar male genital disc | restricted

} REF { REFM|FBrf0049619 |Tremml and Bienz |1989 REFM|FBrf0051569 |de Lorenzi and Bienz |1990 REFM|FBrf0068620 |Orlando and Paro |1993 REFM|FBrf0072541 |Bachiller et al. |1994 REFM|FBrf0080088 |Hendrickson and Sakonju |1995 REFM|FBrf0088118 |Freeland and Kuhn |1996 } } # EOR PPR { RETE|ID 1 FBpp0002312 SYM 1 scb+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 28 Jul 1998 RESZ 761 ID|FBpp0002312 SYM|scb+P ASAL|FBal0071018==scb+ DT|28 Jul 1998 |28 Jul 1998 ASGN|FBgn0003328==scb REFDSR { RDID|FBrf0100355 |Grotewiel et al. |1998 BODP|FBgn0003328==scb protein is concentrated in the mushroom body (corpora pedunculata) | perikarya, calyces, peduncles and &agr;, &bgr;, and &ggr; lobes in adults. | It is also observed in the ellipsoid body. ASM|immunolocalization CVBODP|immunolocalization | A corpora pedunculata

| A cell body corpora pedunculata

| A calyx of corpora pedunculata

| A &agr;-lobe

| A &bgr;-lobe

| A &ggr;-lobe

| A ellipsoid body

} REF { REFM|FBrf0100355 |Grotewiel et al. |1998 } } # EOR PPR { RETE|ID 1 FBpp0002316 SYM 1 grh+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 4 DT 1 5 Nov 1999 RESZ 3039 ID|FBpp0002316 SYM|grh+P SYN|grh+PA ASAL|FBal0069210==grh+ DT|5 Nov 1999 |28 Jul 1998 ID2|FBpp0001549 ASGN|FBgn0004586==grh REFDSR { RDID|FBrf0049797 |Bray et al. |1989 BODP|FBgn0004586==grh protein is first detected at stage 11 in the epidermis and CNS. FBgn0004586==grh | protein expression remains fairly constant in the epidermis but changes | with developmental time in the CNS. Early on, FBgn0004586==grh protein is detected in | one or two medial nuclei per segmental neuromere. Later, it is detected in | more lateral nuclei in a pattern that changes as development proceeds. At | stage 15, expression is observed in around 30 cells per neuromere in a | segmentally repeated pattern. By stage 17, the number of nuclei expressing | the protein has decreased particularly in the abdominal regions of the | ventral nerve cord. FBgn0004586==grh protein is also detected in small regions of the | foregut and the hindgut. FBgn0004586==grh protein and FBgn0000422==Ddc protein are not | co-expressed in the same cells in late embryos. Co-expression was observed | in primary cultures of neuroblasts. ASM|immunolocalization CVBODP|immunolocalization | E | stage >=11 ventral nerve cord | segmentally repeated

| E | stage >=11 epidermis

| E embryonic/larval hindgut

| E embryonic/larval foregut

CVCEL|nucleus } REFDSR { RDID|FBrf0049808 |Dynlacht et al. |1989 CC|FBgn0004586==grh protein was purified from embryonic extracts. Three prominent | polypeptides of 140, 120, and 83kD were observed. All of these bind to | promoter elements within the FBgn0000422==Ddc, FBgn0003944==Ubx, and FBgn0001077==ftz genes. The purified | protein was shown to act as binding site-dependent transcription factor in vitro. } REFDSR { RDID|FBrf0058446 |Santaren et al. |1993 CVBODP| L | third instar dorsal mesothoracic disc

} REFDSR { RDID|FBrf0098901 |Uv et al. |1997 BODP|FBgn0004586==grh protein expression persists in epidermal cells and in parts of the | foregut and hindgut in the larval period. It is also detected in the | trachea, anterior spiracles, proventriculus, and in cells that secrete the | head skeleton. FBgn0004586==grh protein is expressed uniformly in the imaginal discs | and in the optic lobes. ASM|immunolocalization CVBODP|immunolocalization | L epidermis

| L embryonic/larval foregut

| L embryonic/larval hindgut

| L embryonic/larval trachea

| L embryonic/larval anterior spiracle

| L embryonic/larval proventriculus

| L imaginal disc

| L larval optic lobe

| L neuroblast

} REF { REFM|FBrf0049797 |Bray et al. |1989 REFM|FBrf0049808 |Dynlacht et al. |1989 REFM|FBrf0058446 |Santaren et al. |1993 REFM|FBrf0098901 |Uv et al. |1997 } } # EOR PPR { RETE|ID 1 FBpp0002322 SYM 1 norpA+P AAL 1 - PSZ 1 130 HG 1 - DBA 1 - REF 1 1 DT 1 28 Jul 1998 RESZ 1624 ID|FBpp0002322 SYM|norpA+P ASAL|FBal0070830==norpA+ DT|28 Jul 1998 |28 Jul 1998 ASGN|FBgn0004625==norpA REFDSR { RDID|FBrf0058783 |Zhu et al. |1993 PSZ|130 | observed ABOD|polyclonal BODP|Western blots show that FBgn0004625==norpA protein is abundant in extracts from adult | heads. Small amounts are detected in adult bodies. Protein is detected in | homogenates of adult legs, male thorax, female thorax, and male abdomen, | but not in female abdomen. Phospholipase C activity was measured in | Drosophila tissues. A high level of activity was found in heads and a | severeley reduced level was found in heads of FBgn0004625==norpA mutants. The majority | of the activity is localized in the eye. In cli mutants (lacking eyes), | the level is reduced by about 65% indicating that there is some activity in | other tissues such as the ocelli. Low levels of activity could also be | measured in the body. Immunonostaining of adult tissue sections with an | antibody against FBgn0004625==norpA protein shows staining in the retina, ocelli, | optic lobes, cerebrum, and thoracic ganglia. ASM|western blot CVBODP|western blot | A adult head

| A leg

| A | female adult abdomen

| A adult thorax

|enzyme assay or biochemical detection | A adult head

| A eye

|immunolocalization | A retina

| A ocellus

| A thoracic ganglion

| A adult brain

| A optic lobe

} REF { REFM|FBrf0058783 |Zhu et al. |1993 } } # EOR PPR { RETE|ID 1 FBpp0002340 SYM 1 ifc+PB AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 28 Jul 1998 RESZ 383 ID|FBpp0002340 SYM|ifc+PB ASAL|FBal0069264==ifc+ DT|28 Jul 1998 |28 Jul 1998 ASGN|FBgn0001941==ifc REFDSR { RDID|FBrf0091054 |Endo et al. |1996 CC|Predicted from an alternate FBgn0001941==ifc transcript. Significantly smaller than | ifc+P321. Length unspecified. } REF { REFM|FBrf0091054 |Endo et al. |1996 } } # EOR PPR { RETE|ID 1 FBpp0002382 SYM 1 cad+PA AAL 1 197 PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 28 Jul 1998 RESZ 254 ID|FBpp0002382 SYM|cad+PA ASAL|FBal0068729==cad+ DT|28 Jul 1998 |28 Jul 1998 ASGN|FBgn0000251==cad REFDSR { RDID|FBrf0042432 |Mlodzik et al. |1985 AAL|197 } REF { REFM|FBrf0042432 |Mlodzik et al. |1985 } } # EOR PPR { RETE|ID 1 FBpp0002399 SYM 1 Dhod+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 28 Jul 1998 RESZ 529 ID|FBpp0002399 SYM|Dhod+P ASAL|FBal0066830==Dhod+ DT|28 Jul 1998 |28 Jul 1998 ASGN|FBgn0000447==Dhod REFDSR { RDID|FBrf0080501 |Yang et al. |1995 BODP|Using an enzyme assay, FBgn0000447==Dhod protein activity is demonstrated in elongated | spermatid bundles, but is absent from earlier and later stages. ASM|enzyme assay or biochemical detection CVBODP|enzyme assay or biochemical detection | S,A spermatid

} REF { REFM|FBrf0080501 |Yang et al. |1995 } } # EOR PPR { RETE|ID 1 FBpp0002409 SYM 1 pan+P AAL 1 - PSZ 1 - HG 1 + DBA 1 - REF 1 1 DT 1 28 Jul 1998 RESZ 1117 ID|FBpp0002409 SYM|pan+P ASAL|FBal0078829==pan+ DT|28 Jul 1998 |28 Jul 1998 ASGN|FBgn0019664==pan REFDSR { RDID|FBrf0093264 |van de Wetering et al. |1997 HG|Caenorhabditis elegans | pop-1 (U37532) |Homo sapiens | TCF-1E (Z47362) CC|Repeats 3-8 of the FBgn0000117==arm protein interact with aa 1-90 of FBgn0019664==pan in a yeast | two-hybrid assay. The DNA binding site of the FBgn0019664==pan HMG box was assayed, | and revealed the consensus CCTTTGATCTT. Cotransfection of FBgn0000117==arm and FBgn0019664==pan | vectors resulted in transcriptional activation of a CAT or a LUC | reporter, and the C-terminus of FBgn0000117==arm protein was necessary for this | activation. The transactivation capacity of the C-terminus of FBgn0000117==arm was | further demonstrated by fusing it to a GAL4-DNA binding domain, and | assaying expression of a CAT reporter. } REF { REFM|FBrf0093264 |van de Wetering et al. |1997 } } # EOR PPR { RETE|ID 1 FBpp0002438 SYM 1 gsb+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 3 DT 1 5 Jan 2000 RESZ 2939 ID|FBpp0002438 SYM|gsb+P SYN|gsb-d+P ASAL|FBal0100470==gsb+ DT|5 Jan 2000 |16 Sep 1998 ASGN|FBgn0001148==gsb REFDSR { RDID|FBrf0058110 |Gutjahr et al. |1993 ABOD|polyclonal BODP|gsb-d protein is detected in a segmentally repeated pattern a the end of | cellularization. Odd-numbered stripes 1-13 plus an anterior stripe 0 | appear first, and are followed by the appearance of even stripes 2-12 at | mid-gastrulation, and ofstripe 14 at the start of germ band extension. | Towards the end of germ band extension, stripes 4-14 become restricted to | neurectoderm. gsb-d protein expression is highest at this stage, with | expression also detected in 4 anterior and 3 posterior regions. Expression | is also detected in the most medial neuroblasts of row 5. Anterior and | posterior accumulation decreases after this stage. At the end of germ band | retraction, ectodermal expression increases once more, to disappear again | by stage 14. During germ band extension, all neuroblasts of row 5 and 6 | express gsb-p protein, and those of row 7 express it transiently. | Additional cells which may be the VUM precursors also express gsb-p | protein transiently. Low levels of expression persist in a few neuroblasts | and ganglion mother cells until germ band retraction. Mesodermal gsb-p | protein expression is first detected at mid-germ-band extension, persists | in three patches in thoracic segments that subsequently merge, and | dissapears around head involution. Intercalary segment primordium | expression is detected starting at mid germ band extension. Expression is | detected in a dorsal patch of the labral segment and in additional patches | in the presumptive head during the slow phase of germ band extension. | Additional stripes (stripes 15-17) appear in the tail region during germ | band extension. gsb-p protein is expressed transiently in the pharynx and | anal pad during head involution. ASM|immunolocalization CVBODP|immunolocalization | E | stage 4-13

segmentally repeated | E | stage 10 neurectoderm

segmentally repeated | E | stage 10-12 mesoderm

| E | stage 10-12 neuroblast

| E | stage 8-13 embryonic intercalary segment

| E | stage 10-13 labral segment | restricted

| E | stage 9-13 abdominal segment 9..11 | restricted

| E | stage 14 anal pad | restricted

| E | stage 14 embryonic/larval pharynx | restricted

} REFDSR { RDID|FBrf0088118 |Freeland and Kuhn |1996 ASM|immunolocalization CVBODP|immunolocalization | L | third instar female genital disc | restricted

| E | third instar male genital disc | restricted

} REF { REFM|FBrf0043894 |Bopp et al. |1986 REFM|FBrf0058110 |Gutjahr et al. |1993 REFM|FBrf0088118 |Freeland and Kuhn |1996 } } # EOR PPR { RETE|ID 1 FBpp0002439 SYM 1 gsb-n+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 3 DT 1 5 Jan 2000 RESZ 2129 ID|FBpp0002439 SYM|gsb-n+P SYN|gsb-p+P ASAL|FBal0100471==gsb-n+ DT|5 Jan 2000 |16 Sep 1998 ASGN|FBgn0001147==gsb-n REFDSR { RDID|FBrf0058110 |Gutjahr et al. |1993 ABOD|polyclonal BODP|gsb-p protein is first detected at embryonic stage 10, in a subset of | neuroblasts, ganglion mother cells, and neurons. By the end of stage 11 | neuronal expression has intensified and is segmentally repeated, from the | mandibular to the abdominal neuromere. Expression is also detected in the | terminal regions, like the neurons of the brain in the head, the neurons of | abdominal segment 9, and the cells of the anal pad in the tail region. | Subsequently expression continues to be detected in a subset of neurons | until stage 17. Additional expression is detected after germ band | retraction in a few lateral cells per hemisegment, in ventral ectodermal | stripes in the posterior region of each segment, in patches of epidermal | cells or their derivatives in the head region (such as the pharynx), and in | the nuclei of one of the ventral superficial oblique muscles. Expression of | FBgn0000577==en and gsb-p proteins overlap extensively in the central nervous system. ASM|immunolocalization CVBODP|immunolocalization | E | stage 10 neuroblast

| E | stage 10 ganglion mother cell

| E | stage >10 embryonic neuron

| E | stage >11 embryonic neuron | segmentally repeated pattern

| E | stage >13 neuron abdominal segment 9

| E | stage >13 neuron embryonic brain

| E | stage >13 anal pad

| E | stage >13 embryonic/larval pharynx

| E | stage >13 ventral oblique muscle

} REFDSR { RDID|FBrf0088118 |Freeland and Kuhn |1996 ASM|immunolocalization CVBODP|immunolocalization | L | third instar female genital disc | restricted

| L | third instar male genital disc | restricted

} REF { REFM|FBrf0043894 |Bopp et al. |1986 REFM|FBrf0058110 |Gutjahr et al. |1993 REFM|FBrf0088118 |Freeland and Kuhn |1996 } } # EOR PPR { RETE|ID 1 FBpp0002442 SYM 1 vvl+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 215 ID|FBpp0002442 SYM|vvl+P SYN|prd3+P ASAL|FBal0071473==vvl+ DT|21 Nov 2000 |16 Sep 1998 ASGN|FBgn0003995==vvl REF { REFM|FBrf0043921 |Frigerio et al. |1986 } } # EOR PPR { RETE|ID 1 FBpp0002532 SYM 1 Lam+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 3 DT 1 31 Dec 1998 RESZ 1885 ID|FBpp0002532 SYM|Lam+P ASAL|FBal0067976==Lam+ DT|31 Dec 1998 |31 Dec 1998 ASGN|FBgn0002525==Lam REFDSR { RDID|FBrf0050224 |Harel et al. |1989 PCL|FBgn0002525==Lam protein is a nuclear envelope polypeptide which remains in an | envelope-like structure enclosing the mitotic apparatus throughout mitosis. BODP|FBgn0002525==Lam protein localizes to the nucleus during early embryogenesis. ASM|immunolocalization CVBODP|immunolocalization | E | early

CVCEL|nuclear envelope } REFDSR { RDID|FBrf0084310 |Riemer et al. |1995 PCL|FBgn0002525==Lam protein is nuclear. There is some, but not complete, overlap in | subcellular FBgn0002525==Lam and FBgn0010397==LamC protein expression. BODP|Starting with 0-3 hr embryos, FBgn0002525==Lam protein is detected in all developmental | stages. In embryo and larvae, expression is detected in all nuclei. ASM|western blot |immunolocalization CVBODP|western blot | E-A

|immunolocalization | E

| L

CVCEL|nucleus } REFDSR { RDID|FBrf0094065 |Ashery-Padan et al. |1997 PCL|Between stages S4 and S6-S7 of oogenesis, FBgn0002525==Lam protein localizes to the | nuclear periphery in all cell types, but after stage S6-S7, nucleoplasmic | and cytoplasmic accumulation is also observed. During larval, pupal and | adult stages FBgn0002525==Lam protein localizes to the nucleus of most cells. No FBgn0002525==Lam | protein is detected during stages 6-11 of spermiogenesis. ASM|immunolocalization CVBODP|immunolocalization | E-A

| O

CVCEL|nucleus |nucleoplasm |cytoplasm } REF { REFM|FBrf0050224 |Harel et al. |1989 REFM|FBrf0084310 |Riemer et al. |1995 REFM|FBrf0094065 |Ashery-Padan et al. |1997 } } # EOR PPR { RETE|ID 1 FBpp0002546 SYM 1 Ecol\lacZftz.PCPA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 14 May 1999 RESZ 458 ID|FBpp0002546 SYM|Ecol\lacZftz.PCPA SYN|lacZftz.PCPA ASAL|FBal0041452==Ecol\lacZftz.PC DT|14 May 1999 |31 Dec 1998 ASGN|FBgn0014447==Ecol\lacZ REFDSR { RDID|FBrf0042045 |Hiromi et al. |1985 BODP|In embryos, peak accumulation is from 4.5-10.5 hours after egg-laying. ASM|western blot CVBODP|western blot | E

| L | first instar

} REF { REFM|FBrf0042045 |Hiromi et al. |1985 } } # EOR PPR { RETE|ID 1 FBpp0002547 SYM 1 Ecol\lacZP\T.T:KhcPA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 14 May 1999 RESZ 401 ID|FBpp0002547 SYM|Ecol\lacZP\T.T:KhcPA SYN|lacZP\T.T:KhcPA ASAL|FBal0038885==Ecol\lacZP\T.T:Khc DT|14 May 1999 |31 Dec 1998 ASGN|FBgn0014447==Ecol\lacZ REFDSR { RDID|FBrf0073174 |Giniger et al. |1993 CVCEL|microtubule CC|Acts as a reporter of microtubule polarity, accumulating at plus ends. } REF { REFM|FBrf0073174 |Giniger et al. |1993 } } # EOR PPR { RETE|ID 1 FBpp0002574 SYM 1 activin-&bgr;+PA AAL 1 373 PSZ 1 - HG 1 + DBA 1 - REF 1 1 DT 1 21 Apr 1999 RESZ 570 ID|FBpp0002574 SYM|activin-&bgr;+PA ASAL|FBal0090895==activin-&bgr;+ DT|21 Apr 1999 |21 Apr 1999 ASGN|FBgn0024913==activin-&bgr; REFDSR { RDID|FBrf0102959 |Kutty et al. |1998 AAL|373 HG|Xenopus laevis | Activin &bgr; (S61773) |Danio rerio | Activin &bgr;B (X76051) |Homo sapiens | Activin &bgr;A (PID g124279) |Homo sapiens | Activin &bgr;B (PID g106726) CC|The predicted polypeptide could be cleaved to give a 113 aa mature peptide | with homology to vertebrate activins. } REF { REFM|FBrf0102959 |Kutty et al. |1998 } } # EOR PPR { RETE|ID 1 FBpp0002576 SYM 1 how+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Apr 1999 RESZ 644 ID|FBpp0002576 SYM|how+P ASAL|FBal0076686==how+ DT|21 Apr 1999 |21 Apr 1999 ASGN|FBgn0017397==how REFDSR { RDID|FBrf0105220 |Di Fruscio et al. |1998 PCL|A GFP-FBgn0017397==how fusion protein localizes to the nucleus of mouse | NIH 3T3 and Drosophila S2 cells. CVCEL|nucleus CC|FBgn0017397==how protein binds homopolymeric RNA (poly(A)) in vitro. A Myc |-epitope-tagged FBgn0017397==how protein expressed in HeLa cells migrates with a | molecular mass of about 55 kD. } REF { REFM|FBrf0105220 |Di Fruscio et al. |1998 } } # EOR PPR { RETE|ID 1 FBpp0002605 SYM 1 Fmrf+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 2 DT 1 21 Apr 1999 RESZ 1413 ID|FBpp0002605 SYM|Fmrf+P ASAL|FBal0067802==Fmrf+ DT|21 Apr 1999 |21 Apr 1999 ASGN|FBgn0000715==Fmrf REFDSR { RDID|FBrf0054530 |Schneider et al. |1991 BODP|FBgn0000715==Fmrf protein was detected starting at embryonic stage 15 in some medial | protocerebral neurons, followed by some subesophageal neuromeres at stage | 16, and in more superior and medial protocerebral neurons at stage 17. | Expression levels increased in larval stages. ASM|immunolocalization CVBODP|immunolocalization | E | stage >=15 central nervous system | restricted

| E | stage >=15 neuron | subset

| L central nervous system | restricted

| L neuron | subset

} REFDSR { RDID|FBrf0054531 |O'Brien et al. |1991 BODP|FBgn0000715==Fmrf protein expression correlates with FBgn0000715==Fmrf transcript expression. | FBgn0000715==Fmrf protein continues to be detected in prepupal through adult stages. | Many larval neuronal signals continue to be detected in the adult. | Inaddition, adult-specific signals are detected in the adult brain and | ventral ganglion. ASM|immunolocalization CVBODP|immunolocalization | PP-A central nervous system | restricted

| PP-A neuron | subset

} REF { REFM|FBrf0054530 |Schneider et al. |1991 REFM|FBrf0054531 |O'Brien et al. |1991 } } # EOR PPR { RETE|ID 1 FBpp0002612 SYM 1 numb+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 6 DT 1 21 Nov 2000 RESZ 2599 ID|FBpp0002612 SYM|numb+P ASAL|FBal0070835==numb+ DT|21 Nov 2000 |21 Apr 1999 ASGN|FBgn0002973==numb REFDSR { RDID|FBrf0068654 |Rhyu et al. |1994 PCL|FBgn0002973==numb protein associates with the plasma membrane of the sensory organ | precursor cell and of the neuroblast, and is asymmetrically localized. BODP|FBgn0002973==numb protein localizes in a ring along the plasma membrane of the sensory | organ precursor cell, and is distributed asymmetrically to the daughter | cell. During neuroblast division, FBgn0002973==numb protein is asymmetrically | localized in the neuroblast, and segregates into the ganglion mother cell. | Expression is also detected in epidermal cell membranes. ASM|immunolocalization CVBODP|immunolocalization | E sensillum precursor

| E neuroblast

| E embryonic ganglion mother cell

| A external sensory organ precursor cell

| A peripheral nervous system | restricted

CVCEL|plasma membrane } REFDSR { RDID|FBrf0084093 |Knoblich et al. |1995 PCL|FBgn0002973==numb protein is homogenously distributed along the plasma membrane during | interphase and early prophase in embryonic neuroblasts. Beginning in late | prophase, FBgn0002973==numb forms a crescent overlying one of two centromeres and | remainsin this crescent through later stages of mitosis. During telophase, | it segregates into one of the two daughter cells where it is found evenly | distributed along the plasma membrane. FBgn0002973==numb protein localization is | microtubule and actin independent. CVCEL|plasma membrane } REFDSR { RDID|FBrf0095577 |Li et al. |1997 CC|The phosphotyrosine binding domains (PID) of most polypeptides studied | preferentially bind peptides containing an NPXpY motif (X = any amino | acid), whereas the the PID of FBgn0002973==numb protein binds peptides with a "YIGPY#" | motif (# = a hydrophobic amino acid). The affinity of the PID domain for | the peptide increases when the second tyrosine is phosphorylated. The | GP(p)Y core motif is required for high-affinity binding. The same amino | acids in the FBgn0002973==numb PID are likely to bind both the phosphorylated and | non-phosphorylated forms of the peptide. } REF { REFM|FBrf0068654 |Rhyu et al. |1994 REFM|FBrf0084093 |Knoblich et al. |1995 REFM|FBrf0095577 |Li et al. |1997 REFM|FBrf0098349 |Shen et al. |1997 REFM|FBrf0099990 |Chien et al. |1998 REFM|FBrf0103035 |Shen et al. |1998 } } # EOR PPR { RETE|ID 1 FBpp0002623 SYM 1 CtBP+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 315 ID|FBpp0002623 SYM|CtBP+PA SYN|CtBP-PA ASAL|FBal0079492==CtBP+ DT|21 Nov 2000 |22 Apr 1999 ASGN|FBgn0020496==CtBP REFDSR { RDID|FBrf0102176 |Poortinga et al. |1998 ASTR|FBtr0004231==CtBP+RD } REF { REFM|FBrf0102176 |Poortinga et al. |1998 } } # EOR PPR { RETE|ID 1 FBpp0002630 SYM 1 sc-P* AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 5 Nov 1999 RESZ 581 ID|FBpp0002630 SYM|sc-P* ASAL|FBal0071015==sc+ DT|5 Nov 1999 |22 Apr 1999 ASGN|FBgn0004170==sc REFDSR { RDID|FBrf0076492 |Singson et al. |1994 CC|FBgn0000413==da protein alone or in combination with FBgn0000022==ac protein or FBgn0004170==sc protein binds | in vitro to E-box sequences from the FBgn0000216==Brd, FBgn0000591==E(spl), FBgn0002633==HLHm7, and FBgn0003326==sca promoters. } REF { REFM|FBrf0076492 |Singson et al. |1994 } } # EOR PPR { RETE|ID 1 FBpp0002632 SYM 1 da-P* AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 5 Nov 1999 RESZ 581 ID|FBpp0002632 SYM|da-P* ASAL|FBal0068807==da+ DT|5 Nov 1999 |22 Apr 1999 ASGN|FBgn0000413==da REFDSR { RDID|FBrf0076492 |Singson et al. |1994 CC|FBgn0000413==da protein alone or in combination with FBgn0000022==ac protein or FBgn0004170==sc protein binds | in vitro to E-box sequences from the FBgn0000216==Brd, FBgn0000591==E(spl), FBgn0002633==HLHm7, and FBgn0003326==sca promoters. } REF { REFM|FBrf0076492 |Singson et al. |1994 } } # EOR PPR { RETE|ID 1 FBpp0002643 SYM 1 Clk+PB AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 27 Jun 1999 RESZ 376 ID|FBpp0002643 SYM|Clk+PB ASAL|FBal0087184==Clk+ DT|27 Jun 1999 |27 Jun 1999 ASGN|FBgn0023076==Clk REFDSR { RDID|FBrf0102727 |Allada et al. |1998 CC|The shorter form of FBgn0023076==Clk protein is missing the bHLH and PASA domains but | contains the PASB domain. } REF { REFM|FBrf0102727 |Allada et al. |1998 } } # EOR PPR { RETE|ID 1 FBpp0002673 SYM 1 Antp+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 2 DT 1 30 May 2000 RESZ 3044 ID|FBpp0002673 SYM|Antp+P ASAL|FBal0066388==Antp+ DT|30 May 2000 |27 Jun 1999 ASGN|FBgn0000095==Antp REFDSR { RDID|FBrf0043896 |Carroll et al. |1986 ABOD|polyclonal BODP|FBgn0000095==Antp protein is first detected in germ band extended embryos in the | presumptive thoracic region. The region extends from the posterior | compartment of the labial segment to the anterior compartment of A1. The | heaviest staining is in parasegment 4. As the germ band shortens, FBgn0000095==Antp | protein is observed in the ectoderm of posterior T1 and in T2 and T3. As | the germ band shortens further, expression diminishes in posterior T3 and | appears in the ventral nervous system. With germ band shortening, | expression in the ectoderm continues to decrease. FBgn0000095==Antp protein first | appears in the ventral nervous system in 10 pairs of patches in the | neurogenic region. FBgn0000095==Antp protein is present in the ventral nervous system | from the posterior part of T1 to the anterior part of A7. At early stages, | protein levels are uniform between the thoracic and abdominal segments. As | development proceeds protein levels increase in posterior T1, anterior T2 | and anterior T3 and diminish in the abdominal segments. FBgn0000095==Antp protein is | also present in some cells of the PNS during germ band retraction. In the | thorax, areas of strong FBgn0000095==Antp protein do not overlap areas of strong FBgn0003944==Ubx | protein expression. ASM|immunolocalization CVBODP|immunolocalization | E ectoderm

| E | stage >12 embryonic central nervous system

| E | stage >12 embryonic peripheral nervous system | restricted

| E labial segment

| E embryonic prothoracic segment

| E embryonic mesothoracic segment

| E embryonic metathoracic segment

| E embryonic abdominal segment 1..7

CVCEL|nucleus CC|The antibody is expected to recognize all forms of FBgn0000095==Antp protein. } REFDSR { RDID|FBrf0057495 |Ultsch et al. |1992 CC|The secondary structure of an N-terminally elongated FBgn0000095==Antp protein | fragment, including both the homeodomain and the YPWM motif, from amino | acids -14 to +67 was determined by NMR in solution (this study). Results | strongly support the conclusion that the homeodomain is connected through a | flexible linker to the main body in the FBgn0000095==Antp protein and that the minor | groove contacts by residues 1-6 are intrinsic to the DNA binding | interactions of the FBgn0000095==Antp protein (this study). The stability and | specificity of the DNA binding previously observed for the shorter FBgn0000095==Antp | homeodomain polypeptide is preserved for the elongated polypeptide. } REF { REFM|FBrf0043896 |Carroll et al. |1986 REFM|FBrf0057495 |Ultsch et al. |1992 } } # EOR PPR { RETE|ID 1 FBpp0002717 SYM 1 yin+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 13 Sep 1999 RESZ 2220 ID|FBpp0002717 SYM|yin+P ASAL|FBal0075448==yin+ DT|13 Sep 1999 |13 Sep 1999 ASGN|FBgn0015565==yin REFDSR { RDID|FBrf0104507 |Roman et al. |1998 ABOD|polyclonal BODP|FBgn0015565==yin protein is detected in the apical membranes of the midgut and rectal | epithelium, and in basal regions of the rectal papillae. In the female | reproductive tract, expression is in the oviducts, seminal receptacles, and | spermathecal ducts.During oogenesis, FBgn0015565==yin is detected in the oocyte, and | is associated with &agr; yolk spheres in mature oocytes. In embryos, FBgn0015565==yin | protein is detected associated with yolk spheres, and is detected in late | stage embryos when the midgut has engulfed the central yolk mass. Low | levels of expression are detected in the central nervous system neuropil, | with slightly elevated levels in t e &agr; and &bgr; lobes of the mushroom | body. Expression is high in the fat bodies surrounding the central nervous | sytem. Some expression is seen in the antennal nerve. Expression is also | detected in a small number of premeoitic germ cell cysts in testes. ASM|western blot |immunolocalization CVBODP|western blot | E

| A

|immunolocalization | E yolk

| A adult midgut | restricted

| A posterior adult hindgut | restricted

| A adult rectal papilla | basal

| A oviduct

| A seminalreceptacle

| A spermathecal duct

| A uterus

| A neuropil

| A adult antennal nerve

| A &agr;-lobe mushroom body

| A &agr;-lobe mushroom body

| A adult fat body

| A,O | stage S9-S14 oocyte

| A,S primary spermatocyte cyst | restricted

CC|FBgn0015565==yin-transfected HeLa cells exhibit proton-dependent high affinity | alanylalanine transport. An 81.6 kD FBgn0015565==yin protein is detected in FBgn0015565==yin | transfected HeLa cells, as well as in Western blots of Drosophila embryo | and adult protein extracts. } REF { REFM|FBrf0104507 |Roman et al. |1998 } } # EOR PPR { RETE|ID 1 FBpp0002840 SYM 1 sgg+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 2 DT 1 22 Dec 2000 RESZ 231 ID|FBpp0002840 SYM|sgg+P ASAL|FBal0071039==sgg+ DT|22 Dec 2000 |4 Nov 1999 ASGN|FBgn0003371==sgg REF { REFM|FBrf0108395 |Gallet et al. |1999 REFM|FBrf0111519 |Willert et al. |1999 } } # EOR PPR { RETE|ID 1 FBpp0002846 SYM 1 EcR+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 6 Jan 2000 RESZ 191 ID|FBpp0002846 SYM|EcR+P ASAL|FBal0067745==EcR+ DT|6 Jan 2000 |4 Nov 1999 ASGN|FBgn0000546==EcR REF { REFM|FBrf0059134 |Thomas et al. |1993 } } # EOR PPR { RETE|ID 1 FBpp0002847 SYM 1 arm+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 6 DT 1 22 Dec 2000 RESZ 4187 ID|FBpp0002847 SYM|arm+P ASAL|FBal0068658==arm+ DT|22 Dec 2000 |4 Nov 1999 ABODURL|n27a1.html N2 7A1 ARMADILLO ASGN|FBgn0000117==arm REFDSR { RDID|FBrf0065529 |Peifer et al. |1993 PCL|The localization of FBgn0000117==arm protein often parallels the location of adherens junctions. BODP|FBgn0000117==arm protein expression was studied during oogenesis. FBgn0000117==arm protein is | asymmetrically localized within follicle cells. Within each follicle cell, | it accumulates heavily on the lateral cell surface near the apical end | abutting the germ cells. It is less abundant on the rest of the follicle | cell-follicle cell interface. Staining is the heaviest in a band around the | follicle cell near the interface between the lateral and apical surfaces. | The majority of FBgn0000117==arm protein in the ovary is found in the follicle cells | but it is also observed in n rse cells and in the oocyte. Accumulation is | germ cells is first seen at the anterior tip of the germarium. Similar | intense staining is seen at the anterior tip of the testis. As with | follicle cells, FBgn0000117==arm protein accumulates near or at the cell surface of | germ cells but is not concentrated at any one position along the cell-cell | interface. Protein accumulation appears to be heaviest where the nurse | cell-nurse cell junction abuts the overlying follicle cells. It also | accumulates in the cortical region of the oocyte. FBgn0000117==arm protein accumulates | differentially in different follicle cells. Polar ollicle cells show more | intense FBgn0000117==arm staining. ASM|immunolocalization CVBODP|immunolocalization | O, A | female follicle cell

| O, A | female nurse cell

| O, A | female oocyte

CVCEL|cell-cell adherens junction } REFDSR { RDID|FBrf0079169 |Peifer et al. |1994 CC|FBgn0000117==arm protein is phosphorylated on both serine or threonine and on tyrosine | residues. The level of phosphorylation varies in different tissues and at | different times of development. Phosphorylation of FBgn0000117==arm protein is | negatively regulated by FBgn0004009==wg protein. FBgn0003371==sgg protein is required for FBgn0000117==arm | protein phosphorylation. } REFDSR { RDID|FBrf0090729 |Orsulic and Peifer |1996 CC|The binding sites on FBgn0000117==arm protein for FBgn0003391==shg protein and &agr:;Cat were | mapped. The binding site for &agr:;Cat maps to the first 39 amino acids | of FBgn0000117==arm protein. The region necessary for FBgn0003391==shg binding maps to the | central repeats. The central repeat region also appears to be important for | FBgn0000117==arm protein localization to adherens junctions. } REFDSR { RDID|FBrf0091133 |Pai et al. |1996 CC|A 76 amino acid region of FBgn0000117==arm protein is necessary and sufficient for | binding &agr;-Cat protein; point mutations in this region abolish | &agr;-Cat binding in vitro. The N-terminal 258 amino acids of &agr;-Cat | interact with FBgn0000117==arm protein. A large region of FBgn0000117==arm protein spanning six | Armadillo repeats is required for FBgn0003391==shg protein binding; when mutations are | introduced into repeats 3-8, binding is abolished. Forty one amino acids of | the FBgn0003391==shg cytoplasmic tail are sufficient for FBgn0000117==arm protein binding. } REFDSR { RDID|FBrf0107755 |Hamada et al. |1999 CC|FBgn0026597==Axn protein interacts with the Armadillo repeat domain of FBgn0000117==arm protein. } REF { REFM|FBrf0065529 |Peifer et al. |1993 REFM|FBrf0079169 |Peifer et al. |1994 REFM|FBrf0090729 |Orsulic and Peifer |1996 REFM|FBrf0091133 |Pai et al. |1996 REFM|FBrf0107755 |Hamada et al. |1999 REFM|FBrf0111519 |Willert et al. |1999 } } # EOR PPR { RETE|ID 1 FBpp0002893 SYM 1 Mhc+PD AAL 1 - PSZ 1 155 HG 1 - DBA 1 - REF 1 1 DT 1 6 Jan 2000 RESZ 506 ID|FBpp0002893 SYM|Mhc+PD SYN|minor-myosin ASAL|FBal0068063==Mhc+ DT|6 Jan 2000 |6 Jan 2000 ASGN|FBgn0002741==Mhc REFDSR { RDID|FBrf0082353 |Miedema et al. |1995 PSZ|155 | observed BODP|The 155kD form of FBgn0002741==Mhc protein is mainly detected in testis. CVBODP| A | male testis

ASTR|FBtr0005450==Mhc+R4.5 |FBtr0005451==Mhc+R4.2 } REF { REFM|FBrf0082353 |Miedema et al. |1995 } } # EOR PPR { RETE|ID 1 FBpp0002896 SYM 1 aret+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 2 DT 1 22 Dec 2000 RESZ 238 ID|FBpp0002896 SYM|aret+P ASAL|FBal0068657==aret+ DT|22 Dec 2000 |6 Jan 2000 ASGN|FBgn0000114==aret REF { REFM|FBrf0098905 |Webster et al. |1997 REFM|FBrf0107851 |Lie and Macdonald |1999 } } # EOR PPR { RETE|ID 1 FBpp0003022 SYM 1 &agr;Try-P AAL 1 256 PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 11 Apr 2000 RESZ 327 ID|FBpp0003022 SYM|&agr;Try-P ASAL|FBal0074447==&agr;Try+ DT|11 Apr 2000 |11 Apr 2000 ARGS|FBgn0003863 DARTS|FBtr0005397 ASGN|FBgn0003863==&agr;Try REFDSR { RDID|FBrf0104946 |FlyBase |1996- AAL|256 ASTR|FBtr0005397==&agr;Try-RA } REF { REFM|FBrf0104946 |FlyBase |1996- } } # EOR PPR { RETE|ID 1 FBpp0003034 SYM 1 shi+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 13 Apr 2000 RESZ 194 ID|FBpp0003034 SYM|shi+P ASAL|FBal0071044==shi+ DT|13 Apr 2000 |13 Apr 2000 ASGN|FBgn0003392==shi REF { REFM|FBrf0103356 |Roos and Kelly |1998 } } # EOR PPR { RETE|ID 1 FBpp0003059 SYM 1 Ecol\lacZP\T.WPA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 13 Apr 2000 RESZ 472 ID|FBpp0003059 SYM|Ecol\lacZP\T.WPA ASAL|FBal0043887==Ecol\lacZP\T.W DT|13 Apr 2000 |13 Apr 2000 ASGN|FBgn0014447==Ecol\lacZ REFDSR { RDID|FBrf0049800 |Bier et al. |1989 BODP|Observed expression always nuclear, independent of insertion site. CVCEL|nucleus CC|Nuclear expression ascribed to nuclear localization signal derived from | FBgn0013311==P\T sequences. } REF { REFM|FBrf0049800 |Bier et al. |1989 } } # EOR PPR { RETE|ID 1 FBpp0003098 SYM 1 ttk+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 30 May 2000 RESZ 200 ID|FBpp0003098 SYM|ttk+P ASAL|FBal0071410==ttk+ DT|30 May 2000 |30 May 2000 ASGN|FBgn0003870==ttk REF { REFM|FBrf0051631 |Harrison and Travers |1990 } } # EOR PPR { RETE|ID 1 FBpp0003143 SYM 1 &agr;-Cat+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 16 Aug 2000 RESZ 624 ID|FBpp0003143 SYM|&agr;-Cat+P ASAL|FBal0066290==&agr;-Cat+ DT|16 Aug 2000 |16 Aug 2000 ASGN|FBgn0010215==&agr;-Cat REFDSR { RDID|FBrf0091133 |Pai et al. |1996 CVCEL|adherens junction CC|A 76 amino acid region of FBgn0000117==arm protein is necessary and sufficient for | binding &agr;-Cat protein; point mutations in this region abolish | &agr;-Cat binding in vitro. The N-terminal 258 amino acids of &agr;-Cat | interact with FBgn0000117==arm protein. } REF { REFM|FBrf0091133 |Pai et al. |1996 } } # EOR PPR { RETE|ID 1 FBpp0003145 SYM 1 Dredd+P AAL 1 - PSZ 1 - HG 1 + DBA 1 - REF 1 2 DT 1 22 Dec 2000 RESZ 442 ID|FBpp0003145 SYM|Dredd+P SYN|DCP2 ASAL|FBal0079409==Dredd+ DT|22 Dec 2000 |16 Aug 2000 ASGN|FBgn0020381==Dredd REFDSR { RDID|FBrf0099057 |Inohara et al. |1997 HG|Homo sapiens | CASP8 (SWP:Q14790) CC|FBgn0020381==Dredd protein has two death effector domains, and a caspase-like domain. } REF { REFM|FBrf0099057 |Inohara et al. |1997 REFM|FBrf0112020 |Rodriguez et al. |1999 } } # EOR PPR { RETE|ID 1 FBpp0003181 SYM 1 loco+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 22 Aug 2000 RESZ 200 ID|FBpp0003181 SYM|loco+P ASAL|FBal0079315==loco+ DT|22 Aug 2000 |22 Aug 2000 ASGN|FBgn0020278==loco REF { REFM|FBrf0108191 |Granderath et al. |1999 } } # EOR PPR { RETE|ID 1 FBpp0003258 SYM 1 Parp+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 443 ID|FBpp0003258 SYM|Parp+PA ASAL|FBal0068145==Parp+ DT|21 Nov 2000 |21 Nov 2000 ASGN|FBgn0010247==Parp REFDSR { RDID|FBrf0102327 |Hanai et al. |1998 ASTR|FBtr0006175==Parp+R2.6 CC|A smaller FBgn0010247==Parp protein which is generated from an alternatively spliced | mRNA lacks the auto-modification domain. } REF { REFM|FBrf0102327 |Hanai et al. |1998 } } # EOR PPR { RETE|ID 1 FBpp0003280 SYM 1 shot+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 1382 ID|FBpp0003280 SYM|shot+PA SYN|isoform A ASAL|FBal0071047==shot+ DT|21 Nov 2000 |21 Nov 2000 ASGN|FBgn0013733==shot REFDSR { RDID|FBrf0105832 |Gregory and Brown |1998 ABOD|polyclonal BODP|FBgn0013733==shot protein is expressed in specific epidermal cells that attach to | muscles, linking the muscles to the exoskeleton. It is strongly expressed | in the same cells that express high levels of PS integrins. Strong | expression is also observed inthe proventriculus and the pharynx. Weak | expression is observed in the PNS in the scolopale of the chordotonal organs. CVBODP|immunolocalization | E | stage 16 muscle attachment site

| E | stage 16 embryonic/larval proventriculus

| E | stage 16 embryonic/larval pharynx

| E | stage 16 scolopidia

ASTR|FBtr0006194==shot+RA CC|The FBgn0013733==shot protein shows similarily to three distinct classes of proteins. | The amino-terminal portion resembles the plakin class of cytoskeletal | cross-linker proteins. The central portion of the protein consists of 22 | 109aa dystrophin-like repeats. The carboxy-terminal part of the protein has | similarity to Gas2, an actin-associated protein expressed in | growth-arrested cultured cells. } REF { REFM|FBrf0105832 |Gregory and Brown |1998 } } # EOR PPR { RETE|ID 1 FBpp0003281 SYM 1 shot+PB AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 319 ID|FBpp0003281 SYM|shot+PB SYN|isoform B ASAL|FBal0071047==shot+ DT|21 Nov 2000 |21 Nov 2000 ASGN|FBgn0013733==shot REFDSR { RDID|FBrf0105832 |Gregory and Brown |1998 ASTR|FBtr0006195==shot+RB } REF { REFM|FBrf0105832 |Gregory and Brown |1998 } } # EOR PPR { RETE|ID 1 FBpp0003282 SYM 1 shot+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 2 DT 1 21 Nov 2000 RESZ 2657 ID|FBpp0003282 SYM|shot+P ASAL|FBal0071047==shot+ DT|21 Nov 2000 |21 Nov 2000 ASGN|FBgn0013733==shot REFDSR { RDID|FBrf0105940 |Strumpf and Volk |1998 ABOD|polyclonal BODP|FBgn0013733==shot protein is apparent from stage 14 of embryogenesis. In the last | stages of muscle development, FBgn0013733==shot protein is found at high levels in | muscle-bound tendon cells where it is concentrated at the surface, | presumably along the membrane. Lower levels are observed in epidermal cells | and chordotonal organs. ASM|immunolocalization CVBODP|immunolocalization | E | stage >=14 muscle attachment site

| E | stage 16 tendon cell

| E | stage 16 epidermis

| E | stage 16 chordotonal organ

CC|FBgn0013733==shot protein shows regions of similarity to three distinct vertebrate | cytoskeletal-related protein families. The amino-terminal portion resembles | the amino-terminal domain of plakin family members. The central portion has | 22 repeats of 105-113 amino acids that are similar to the spectrin-like | repeats found in dystrophin, &agr;-actinin, and spectrin. The carboxy | terminal domain shows similarity to the Gar2/GAR22 family of | cytoskeletal-related proteins. } REFDSR { RDID|FBrf0125142 |Lee et al. |2000 BODP|FBgn0013733==shot protein is detected in developing axons starting in embryonic stage | 12. It can be detected in the intersegmental nerve and in the cortical | regions of the neuronal cell bodies of chordotonal and dorsal cluster | sensory neurons. The antibody used for this analysis does not recognize the | short isoforms of the protein. CVBODP|immunolocalization | E | stage >=12 axon

| E chordotonal organ

| E anterior fascicle

| E sensory neuron

CC|The longer FBgn0013733==shot proteins contain an N-terminal actin-binding domain, a | long central triple helical coiled-coil domain, and a C-terminal domain | that contains two EF-hand Ca2+-binding motifs and a region of | homology to the growth arrest protein Gas2. At least 4 different promoters | and alternative splicing occuring at a number of different sites throughout | the gene lead to a number of different protein isoforms. Some isoforms lack | some or all of the actin-binding domain at the N-terminal end. Some | isoforms contain an extra 300aa within the central rod region and the | various isoforms have different classes of globular C-terminal domains. } REF { REFM|FBrf0105940 |Strumpf and Volk |1998 REFM|FBrf0125142 |Lee et al. |2000 } } # EOR PPR { RETE|ID 1 FBpp0003325 SYM 1 shot+PC AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 291 ID|FBpp0003325 SYM|shot+PC ASAL|FBal0071047==shot+ DT|21 Nov 2000 |21 Nov 2000 ASGN|FBgn0013733==shot REFDSR { RDID|FBrf0125142 |Lee et al. |2000 ASTR|FBtr0006269==shot+RC } REF { REFM|FBrf0125142 |Lee et al. |2000 } } # EOR PPR { RETE|ID 1 FBpp0003326 SYM 1 shot+PD AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 291 ID|FBpp0003326 SYM|shot+PD ASAL|FBal0071047==shot+ DT|21 Nov 2000 |21 Nov 2000 ASGN|FBgn0013733==shot REFDSR { RDID|FBrf0125142 |Lee et al. |2000 ASTR|FBtr0006270==shot+RD } REF { REFM|FBrf0125142 |Lee et al. |2000 } } # EOR PPR { RETE|ID 1 FBpp0003328 SYM 1 shot+PF AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 291 ID|FBpp0003328 SYM|shot+PF ASAL|FBal0071047==shot+ DT|21 Nov 2000 |21 Nov 2000 ASGN|FBgn0013733==shot REFDSR { RDID|FBrf0125142 |Lee et al. |2000 ASTR|FBtr0006272==shot+RF } REF { REFM|FBrf0125142 |Lee et al. |2000 } } # EOR PPR { RETE|ID 1 FBpp0003344 SYM 1 endos+PA AAL 1 - PSZ 1 - HG 1 + DBA 1 - REF 1 1 DT 1 6 Jan 2005 RESZ 323 ID|FBpp0003344 SYM|endos+PA SYN|l(3)S067006+PA ASAL|FBal0134574==endos+ DT|6 Jan 2005 |21 Nov 2000 ASGN|FBgn0061515==endos REFDSR { RDID|FBrf0127030 |Burmester et al. |2000 HG|C. elegans | C50D2.7 (Acc. AF040642) } REF { REFM|FBrf0127030 |Burmester et al. |2000 } } # EOR PPR { RETE|ID 1 FBpp0003353 SYM 1 sbb+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 392 ID|FBpp0003353 SYM|sbb+P ASAL|FBal0095934==sbb+ DT|21 Nov 2000 |21 Nov 2000 ASGN|FBgn0010575==sbb REFDSR { RDID|FBrf0127316 |Senti et al. |2000 BODP|FBgn0010575==sbb protein is widely expressed in eye-antennal discs. CVBODP|immunolocalization | L eye disc | ubiquitous

} REF { REFM|FBrf0127316 |Senti et al. |2000 } } # EOR PPR { RETE|ID 1 FBpp0003377 SYM 1 babo+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 998 ID|FBpp0003377 SYM|babo+P ASAL|FBal0066409==babo+ DT|21 Nov 2000 |21 Nov 2000 ASGN|FBgn0011300==babo REFDSR { RDID|FBrf0106271 |Brummel et al. |1999 CC|FBgn0011300==babo protein activates TGF-&bgr;/Activin response elements, but not BMP | response elements, in in vitro assays. Activated FBgn0011300==babo protein | phosphorylates the C-terminal SSXS motif of FBgn0025800==Smox protein. FBgn0011655==Med and | FBgn0025800==Smox proteins form some complexes in the absence of activated FBgn0011300==babo | protein, but the level of complex formation increases significantly in the | presence of the activated FBgn0011300==babo protein. FBgn0025800==Smox protein also interacts | transiently with FBgn0003169==put-FBgn0011300==babo protein complexes. } REF { REFM|FBrf0106271 |Brummel et al. |1999 } } # EOR PPR { RETE|ID 1 FBpp0003399 SYM 1 qtc+PB AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 293 ID|FBpp0003399 SYM|qtc+PB ASAL|FBal0101934==qtc+ DT|21 Nov 2000 |21 Nov 2000 ASGN|FBgn0028572==qtc REFDSR { RDID|FBrf0127087 |Gaines et al. |2000 ASTR|FBtr0006373==qtc+RB } REF { REFM|FBrf0127087 |Gaines et al. |2000 } } # EOR PPR { RETE|ID 1 FBpp0003408 SYM 1 att+PA AAL 1 - PSZ 1 - HG 1 + DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 289 ID|FBpp0003408 SYM|att+PA DT|21 Nov 2000 |21 Nov 2000 REFDSR { RDID|FBrf0089733 |Madigan et al. |1996 HG|Bos taurus | GDC (X66035) ASTR|FBtr0006390==att+R1.8 |FBtr0006391==att+R1.6 } REF { REFM|FBrf0089733 |Madigan et al. |1996 } } # EOR PPR { RETE|ID 1 FBpp0003409 SYM 1 att+PB AAL 1 - PSZ 1 - HG 1 + DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 742 ID|FBpp0003409 SYM|att+PB DT|21 Nov 2000 |21 Nov 2000 REFDSR { RDID|FBrf0089733 |Madigan et al. |1996 HG|Bos taurus | GDC (X66035) ASTR|FBtr0006392==att+R1.4 CC|The testis-specific 1.4 kb FBgn0019839==att transcript has the potential to encode two | distinct proteins. In vitro translation experiments demonstrate that both | proteins can be produced. One protein, which may start at a non-consensus | CUG, is a shorter version of the protein encoded by the soma-specific FBgn0019839==att | transcript. The second putative ORF is in a different reading frame than | the somatic transcript and has no homology to known proteins. } REF { REFM|FBrf0089733 |Madigan et al. |1996 } } # EOR PPR { RETE|ID 1 FBpp0003410 SYM 1 att+PC AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 21 Nov 2000 RESZ 734 ID|FBpp0003410 SYM|att+PC DT|21 Nov 2000 |21 Nov 2000 REFDSR { RDID|FBrf0089733 |Madigan et al. |1996 ASTR|FBtr0006392==att+R1.4 CC|The testis-specific 1.4 kb FBgn0019839==att transcript has the potential to encode two | distinct proteins. In vitro translation experiments demonstrate that both | proteins can be produced. One putative ORF, which may start at a | non-consensus CUG, is a shorter version of the putative ORF encoded by the | soma-specific FBgn0019839==att transcript. The second putative testis-specific ORF is | in a different reading frame than the somatic ORF and has no homology to | known proteins. } REF { REFM|FBrf0089733 |Madigan et al. |1996 } } # EOR PPR { RETE|ID 1 FBpp0003491 SYM 1 dl+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 12 Feb 2001 RESZ 185 ID|FBpp0003491 SYM|dl+P ASAL|FBal0068833==dl+ DT|12 Feb 2001 |12 Feb 2001 ASGN|FBgn0000462==dl REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0003492 SYM 1 &agr;-Adaptin+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 2 May 2001 RESZ 236 ID|FBpp0003492 SYM|&agr;-Adaptin+P SYN|dri+P ASAL|FBal0075450==&agr;-Adaptin+ DT|2 May 2001 |12 Feb 2001 ASGN|FBgn0015567==&agr;-Adaptin REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0003497 SYM 1 cnc+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 12 Feb 2001 RESZ 873 ID|FBpp0003497 SYM|cnc+P ASAL|FBal0068767==cnc+ DT|12 Feb 2001 |12 Feb 2001 ASGN|FBgn0000338==cnc REFDSR { RDID|FBrf0105883 |McGinnis et al. |1998 BODP|FBgn0000338==cnc antiserum detects a low level ubiquitous staining in syncytial | embryos. From stage 6-14, staining is localized to the mandibular and | labral segments. After stage 14 a low level ubiquitous staining is observed | in addition to the strong staining in the mandibular and labral cells. The | antibody recognizes all FBgn0000338==cnc isoforms. ASM|immunolocalization CVBODP|immunolocalization | E | stage >=6 embryonic mandibular segment

| E | stage >=6 embryonic labral segment

| E | early

ubiquitous | E | stage >14

ubiquitous } REF { REFM|FBrf0105883 |McGinnis et al. |1998 } } # EOR PPR { RETE|ID 1 FBpp0003502 SYM 1 ATPsyn-&ggr;+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 12 Feb 2001 RESZ 331 ID|FBpp0003502 SYM|ATPsyn-&ggr;+PA ASAL|FBal0079279==ATPsyn-&ggr;+ DT|12 Feb 2001 |12 Feb 2001 ASGN|FBgn0020235==ATPsyn-&ggr; REFDSR { RDID|FBrf0106292 |Caggese et al. |1999 ASTR|FBtr0006677==ATPsyn-&ggr;+RA } REF { REFM|FBrf0106292 |Caggese et al. |1999 } } # EOR PPR { RETE|ID 1 FBpp0003505 SYM 1 Scs&agr;+PA AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 12 Feb 2001 RESZ 315 ID|FBpp0003505 SYM|Scs&agr;+PA ASAL|FBal0074212==Scs&agr;+ DT|12 Feb 2001 |12 Feb 2001 ASGN|FBgn0004888==Scs&agr; REFDSR { RDID|FBrf0106292 |Caggese et al. |1999 ASTR|FBtr0006681==Scs&agr;+RA } REF { REFM|FBrf0106292 |Caggese et al. |1999 } } # EOR PPR { RETE|ID 1 FBpp0003515 SYM 1 kel+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 12 Feb 2001 RESZ 587 ID|FBpp0003515 SYM|kel+P ASAL|FBal0069287==kel+ DT|12 Feb 2001 |12 Feb 2001 ASGN|FBgn0001301==kel REFDSR { RDID|FBrf0074302 |Robinson et al. |1994 BODP|FBgn0001301==kel protein is observed in ring canals starting in germarium region 3. | Initially staining is seen in a subset of ring canals. All ring canals are | stained by stage 3. CVBODP|immunolocalization | O,A | stage >S1 nurse cell ring canal

| O,A | germarium region 3 nurse cell ring canal

} REF { REFM|FBrf0074302 |Robinson et al. |1994 } } # EOR PPR { RETE|ID 1 FBpp0003544 SYM 1 Dl+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 23 Apr 2001 RESZ 214 ID|FBpp0003544 SYM|Dl+P ASAL|FBal0066914==Dl+ DT|23 Apr 2001 |23 Apr 2001 ABODURL|c594.9b.html C594.9B ASGN|FBgn0000463==Dl REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0003546 SYM 1 chp+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 23 Apr 2001 RESZ 213 ID|FBpp0003546 SYM|chp+P ASAL|FBal0068756==chp+ DT|23 Apr 2001 |23 Apr 2001 ABODURL|24b10.html 24B10 ASGN|FBgn0000313==chp REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0003547 SYM 1 eya+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 15 Oct 2001 RESZ 236 ID|FBpp0003547 SYM|eya+P SYN|cli+P ASAL|FBal0126664==eya+ DT|15 Oct 2001 |23 Apr 2001 ABODURL|eya10h6.html eya10H6 ASGN|FBgn0000320==eya REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0003549 SYM 1 crb+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 23 Apr 2001 RESZ 209 ID|FBpp0003549 SYM|crb+P ASAL|FBal0068782==crb+ DT|23 Apr 2001 |23 Apr 2001 ABODURL|cq4.html Cq4 ASGN|FBgn0000368==crb REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0003550 SYM 1 orb+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 23 Apr 2001 RESZ 293 ID|FBpp0003550 SYM|orb+P ASAL|FBal0070847==orb+ DT|23 Apr 2001 |23 Apr 2001 ABODURL|orb4h8.html FBgn0004882==orb 4H8 |orb6h4.html FBgn0004882==orb 6H4 ASGN|FBgn0004882==orb REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0003554 SYM 1 &agr;-Spec+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 23 Apr 2001 RESZ 209 ID|FBpp0003554 SYM|&agr;-Spec+P ASAL|FBal0066293==&agr;-Spec+ DT|23 Apr 2001 |23 Apr 2001 ASGN|FBgn0003470==&agr;-Spec REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0003558 SYM 1 en+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 23 Apr 2001 RESZ 185 ID|FBpp0003558 SYM|en+P ASAL|FBal0068909==en+ DT|23 Apr 2001 |23 Apr 2001 ASGN|FBgn0000577==en REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0003560 SYM 1 Nrt+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 23 Apr 2001 RESZ 188 ID|FBpp0003560 SYM|Nrt+P ASAL|FBal0068126==Nrt+ DT|23 Apr 2001 |23 Apr 2001 ASGN|FBgn0004108==Nrt REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0003562 SYM 1 CycA+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 23 Apr 2001 RESZ 191 ID|FBpp0003562 SYM|CycA+P ASAL|FBal0066524==CycA+ DT|23 Apr 2001 |23 Apr 2001 ASGN|FBgn0000404==CycA REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0003564 SYM 1 pnut+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 23 Apr 2001 RESZ 191 ID|FBpp0003564 SYM|pnut+P ASAL|FBal0070903==pnut+ DT|23 Apr 2001 |23 Apr 2001 ASGN|FBgn0013726==pnut REF { REFM|FBrf0105495 |FlyBase |1992- } } # EOR PPR { RETE|ID 1 FBpp0003566 SYM 1 elav+P AAL 1 - PSZ 1 - HG 1 - DBA 1 - REF 1 1 DT 1 23 Apr 2001 RESZ 191 ID|FBpp0003566 SYM|elav+P ASAL|FBal00689